RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PLS1Q14651 629 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ARID5BQ14865 1188 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 MFSD13AQ14CX5 517 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CNN3Q15417 329 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 MTHFSDQ2M296 383 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 C2CD6Q53TS8 623 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ACER2Q5QJU3 275 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 WSCD1Q658N2 575 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 NADSYN1Q6IA69 706 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 MPRIPQ6WCQ1 1025 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 DTHD1Q6ZMT9 781 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SLC26A9Q7LBE3 791 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 GRAMD1CQ8IYS0 662 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ZNF786Q8N393 782 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SLC37A3Q8NCC5 494 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 OR13C3Q8NGS6 347 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 IL31RAQ8NI17 732 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 VANGL1Q8TAA9 524 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 YIPF5Q969M3 257 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 FUBP1Q96AE4 644 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 FAM136AQ96C01 138 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 TEKT5Q96M29 485 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 UBAC1Q9BSL1 405 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 RSRP1Q9BUV0 290 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SLC22A4Q9H015 551 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 QRSL1Q9H0R6 528 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 NMUR1Q9HB89 426 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 NPHS2Q9NP85 383 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 LZTFL1Q9NQ48 299 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 GDE1Q9NZC3 331 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CNIH4Q9P003 139 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 B4GALT6Q9UBX8 382 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CDH9Q9ULB4 789 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PCDHA6Q9UN73 950 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CCL27Q9Y4X3 112 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PCDHA8Q9Y5H6 950 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ADGRG1Q9Y653 693 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 DNMBPQ6XZF7 1577 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 NAV1Q8NEY1 1877 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 RTEL1-TNFRSF6BF6WH68 1400 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 AK9Q5TCS8 1911 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PDS5AQ29RF7 1337 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 AQP12BA6NM10 295 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SLC16A3O15427 465 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 ARHGAP6O43182 974 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TLX3O43711 291 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 DFNA5O60443 496 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 IPO13O94829 963 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 HTR3BO95264 441 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TNFRSF6BO95407 300 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 AK1P00568 194 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ADH1AP07327 375 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 FDPSP14324 419 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 RAB4AP20338 218 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 DDCP20711 480 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PRPS1L1P21108 318 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CHRNA3P32297 505 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 EIF6P56537 245 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 RTP1P59025 263 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SIGLEC14Q08ET2 396 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 DCTN2Q13561 401 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 KARSQ15046 597 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 STXBP2Q15833 593 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 FAM83EQ2M2I3 478 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TRIM61Q5EBN2 209 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 BEX5Q5H9J7 111 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TEX30Q5JUR7 227 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 Q5PR19 223 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TBCELQ5QJ74 424 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ATPAF1Q5TC12 328 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 CDC73Q6P1J9 531 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PGBD2Q6P3X8 592 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CYP2U1Q7Z449 544 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 AHI1Q8N157 1196 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CA5BP1Q8WTZ4 195 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 DIO2Q92813 273 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 USP7Q93009 1102 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 KTI12Q96EK9 354 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 DPYSL5Q9BPU6 564 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CELF4Q9BZC1 486 aaKnown RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 VCXQ9H320 206 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 SEMA6CQ9H3T2 930 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ARHGEF4Q9NR80 690 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 FBXO28Q9NVF7 368 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 GIN1Q9NXP7 522 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 COA4Q9NYJ1 87 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 KCND2Q9NZV8 630 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TMEM59LQ9UK28 342 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TSPAN16Q9UKR8 245 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PALD1Q9ULE6 856 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 NCKAP1Q9Y2A7 1128 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.49□□□□□ -1.85
UBR3-208ENST00000474426 GAPVD1Q14C86 1478 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 PFASO15067 1338 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 A0A1W2PRG0 241 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 ARNTLO00327 626 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 CCRL2O00421 344 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 MEIS1O00470 390 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 C2CD2LO14523 706 aa3.49□□□□□ -1.85
UBR3-208ENST00000474426 AQP9O43315 295 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms