RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 GFM1Q96RP9 751 aaKnown RBP20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 DPH1Q9BZG8 443 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 RAI2Q9Y5P3 530 aa20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 FASNP49327 2511 aaKnown RBP20.38■□□□□ 0.85
PDLIM4-206ENST00000474421 UNC13CQ8NB66 2214 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 CCDC187A0A096LP49 1063 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 CASP14P31944 242 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 GARSP41250 739 aaKnown RBP20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 MAXP61244 160 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 GALNT2Q10471 571 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 TRAF2Q12933 501 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 EIF3IQ13347 325 aaKnown RBP20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 PDK2Q15119 407 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 OGFOD3Q6PK18 319 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 GPR155Q7Z3F1 870 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 KCTD6Q8NC69 237 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 FAM46DQ8NEK8 389 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 GPR156Q8NFN8 814 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 KCNE4Q8WWG9 221 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 CTNNBL1Q8WYA6 563 aaPredicted RBP20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 FATE1Q969F0 183 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 DTD2Q96FN9 168 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 MCCC1Q96RQ3 725 aaPredicted RBP20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 ZNF670Q9BS34 389 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 STRADBQ9C0K7 418 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 POLR1EQ9GZS1 481 aaKnown RBP20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 CYP4F12Q9HCS2 524 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 NT5MQ9NPB1 228 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 CTTNBP2NLQ9P2B4 639 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 AMACRQ9UHK6 382 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 MOSPD1Q9UJG1 213 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 PPIL1Q9Y3C6 166 aa20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 ARHGEF17Q96PE2 2063 aaPredicted RBP20.37■□□□□ 0.85
PDLIM4-206ENST00000474421 PRSS38A1L453 326 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 PROSCO94903 275 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 KRT7P08729 469 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 CD48P09326 243 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 H2AFZP0C0S5 128 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 PNLIPP16233 465 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 GLB1P16278 677 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 TEAD1P28347 426 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 ARSEP51690 589 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 ITKQ08881 620 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 MMRN1Q13201 1228 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 DPYSL3Q14195 570 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 PAFAH1B3Q15102 231 aaKnown RBP20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 DENND2CQ68D51 928 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 H2AFVQ71UI9 128 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 CBARPQ8N350 705 aaPredicted RBP20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 KIAA1524Q8TCG1 905 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 LIN37Q96GY3 246 aaPredicted RBP20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 NAF1Q96HR8 494 aaKnown RBP20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 SEMA3CQ99985 751 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 LGR4Q9BXB1 951 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 TEX101Q9BY14 249 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 TMEM168Q9H0V1 697 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 MRPL40Q9NQ50 206 aaKnown RBP20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 APPL1Q9UKG1 709 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 NENFQ9UMX5 172 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 BAHCC1Q9P281 2608 aa20.36■□□□□ 0.85
PDLIM4-206ENST00000474421 TEX51A0A1B0GUA7 166 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 NPIPB15A6NHN6 443 aaPredicted RBP20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 MFSD11O43934 449 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 RPLP0P05388 317 aaKnown RBP20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 MX2P20592 715 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 CA4P22748 312 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 ETV3P41162 512 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 TMPRSS3P57727 454 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 PEX6Q13608 980 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 TRIM14Q14142 442 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 SLC18A3Q16572 532 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 IFI16Q16666 785 aaKnown RBP20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 ZSCAN23Q3MJ62 389 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 ANKRD20A8PQ5CZ79 823 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 CERCAMQ5T4B2 595 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 KCTD16Q68DU8 428 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 NYAP1Q6ZVC0 841 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 HSD11B1LQ7Z5J1 315 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 HEATR4Q86WZ0 1026 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 LSM14AQ8ND56 463 aaKnown RBP20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 MAML1Q92585 1016 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 TMEM74Q96NL1 305 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 BBC3Q96PG8 261 aaPredicted RBP20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 LRRN3Q9H3W5 708 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 DPEP2Q9H4A9 486 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 RABGEF1Q9UJ41 708 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 DNPEPQ9ULA0 475 aa20.35■□□□□ 0.85
PDLIM4-206ENST00000474421 A0A1W2PNU3 283 aaPredicted RBP20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 D6RAR5 112 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 TK2O00142 265 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 MATN3O15232 486 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 CBFA2T2O43439 604 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 LHCGRP22888 699 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 CCNCP24863 283 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 GJC1P36383 396 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 PDX1P52945 283 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 CXADRP78310 365 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 CCL7P80098 99 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 CDK3Q00526 305 aa20.34■□□□□ 0.85
PDLIM4-206ENST00000474421 DPTQ07507 201 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms