RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CCDC112Q8NEF3 446 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 SNED1Q8TER0 1413 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 AFG1LQ8WV93 481 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 MAGEB10Q96LZ2 347 aaPredicted RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 ANKRD27Q96NW4 1050 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 ZSCAN5AQ9BUG6 496 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 POLR1EQ9GZS1 481 aaKnown RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 HDHD2Q9H0R4 259 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 SNX25Q9H3E2 840 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 SALL1Q9NSC2 1324 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 DNAJC11Q9NVH1 559 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 EURLQ9NYK6 297 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 MRPL15Q9P015 296 aaKnown RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 HACD3Q9P035 362 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 PCDHB10Q9UN67 800 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 SLC9A8Q9Y2E8 581 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 LYVE1Q9Y5Y7 322 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 MYO18BQ8IUG5 2567 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 A0A1W2PPC4 97 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 A0A1W2PQ09 198 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 AQP12BA6NM10 295 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 PSMD11O00231 422 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 AVPP01185 164 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 KRT6AP02538 564 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 KRT6BP04259 564 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 MMP2P08253 660 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 GSTA2P09210 222 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CHRNB1P11230 501 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CD1BP29016 333 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CHRNA3P32297 505 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 PHKA2P46019 1235 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CLCNKBP51801 687 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ACTR3P61158 418 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 DLG4P78352 724 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 XIAPP98170 497 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 PLOD1Q02809 727 aaPredicted RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ZNF33BQ06732 778 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 TEFQ10587 303 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 TSTA3Q13630 321 aaPredicted RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ZNF829Q3KNS6 432 aaPredicted RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ANGEL2Q5VTE6 544 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 DAB2IPQ5VWQ8 1189 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ZNF385CQ66K41 422 aaPredicted RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CYP20A1Q6UW02 462 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 PRICKLE2Q7Z3G6 844 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ADGRA1Q86SQ6 560 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 BIVMQ86UB2 503 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 C12orf50Q8NA57 414 aaPredicted RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 MINDY2Q8NBR6 621 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 GALNT11Q8NCW6 608 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ANGPTL6Q8NI99 470 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 SNX29Q8TEQ0 813 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CAPSLQ8WWF8 208 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CPA5Q8WXQ8 436 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 COA7Q96BR5 231 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 BBS4Q96RK4 519 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 DHRS9Q9BPW9 319 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 TRIM15Q9C019 465 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 C12orf65Q9H3J6 166 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 RNPEPQ9H4A4 650 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ST6GALNAC4Q9H4F1 302 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 SLC28A3Q9HAS3 691 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 KCNK12Q9HB15 430 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 MKNK2Q9HBH9 465 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 KCNH7Q9NS40 1196 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ARMC1Q9NVT9 282 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 THG1LQ9NWX6 298 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 KLHL28Q9NXS3 571 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ANKMY1Q9P2S6 941 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 SPASTQ9UBP0 616 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 DTX4Q9Y2E6 619 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 A0A0A0MRY4 1105 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CBX4O00257 560 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 DNAJB6O75190 326 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 TADA2AO75478 443 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 RAD17O75943 681 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 PGLSO95336 258 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CHEK2O96017 543 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 AK1P00568 194 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ASS1P00966 412 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CELA3AP09093 270 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 FDPSP14324 419 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 BMPR1AP36894 532 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ALDH1A3P47895 512 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 KCNC1P48547 511 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 KRT6CP48668 564 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 GNAQP50148 359 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 AIF1P55008 147 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 EIF3BP55884 814 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 YWHAEP62258 255 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ALDH6A1Q02252 535 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 DAG1Q14118 895 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ANGPT1Q15389 498 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 FAM187BQ17R55 369 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 GLE1Q53GS7 698 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 KIAA1161Q6NSJ0 714 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 TRIM46Q7Z4K8 759 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 CAMKMTQ7Z624 323 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 ZNF295-AS1Q8N0V1 137 aa6.11□□□□□ -1.43
SMARCE1-208ENST00000474246 SIX6OS1Q8N1H7 587 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms