RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PI4KAP42356 2102 aa12.43□□□□□ -0.42
DDX56-209ENST00000473924 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.42□□□□□ -0.42
DDX56-209ENST00000473924 POM121BA6NF01 834 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 PSMD3O43242 534 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 GDF9O60383 454 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 CER1O95813 267 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 AGTP01019 485 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 SLC4A1P02730 911 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 PCCBP05166 539 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 FGF1P05230 155 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 ETS1P14921 441 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 IGFALSP35858 605 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 FDFT1P37268 417 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 ETV3P41162 512 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 PAFAH1B1P43034 410 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 CHRNA4P43681 627 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 RABIFP47224 123 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 LMAN1P49257 510 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 NXPH1P58417 271 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 ARHGAP8P85298 464 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 PTSQ03393 145 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 IRF4Q15306 451 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 WSCD2Q2TBF2 565 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 SIRPB2Q5JXA9 342 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 SYT10Q6XYQ8 523 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 KYAT3Q6YP21 454 aaKnown RBP12.42□□□□□ -0.42
DDX56-209ENST00000473924 Q6ZSR6 202 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 Q6ZVL8 140 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 HSD11B1LQ7Z5J1 315 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 ABI3BPQ7Z7G0 1075 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 MINDY1Q8N5J2 469 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 TP53I13Q8NBR0 393 aaPredicted RBP12.42□□□□□ -0.42
DDX56-209ENST00000473924 OR13H1Q8NG92 308 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 ATL2Q8NHH9 583 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 BMFQ96LC9 184 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 COQ10AQ96MF6 247 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 LYSMD1Q96S90 227 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 TBL1YQ9BQ87 522 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 APOL2Q9BQE5 337 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 GAREM1Q9H706 876 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 LRRC40Q9H9A6 602 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 ZFYVE1Q9HBF4 777 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 MAGEE1Q9HCI5 957 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 TMEM9BQ9NQ34 198 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 GDF3Q9NR23 364 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 MBNL1Q9NR56 388 aaKnown RBP12.42□□□□□ -0.42
DDX56-209ENST00000473924 SHOC2Q9UQ13 582 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 ADAMTS9Q9P2N4 1935 aa12.42□□□□□ -0.42
DDX56-209ENST00000473924 RIF1Q5UIP0 2472 aaKnown RBP12.42□□□□□ -0.42
DDX56-209ENST00000473924 FRYLO94915 3013 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 USP12O75317 370 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 C1SP09871 688 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 ATXN1LP0C7T5 689 aaKnown RBP12.41□□□□□ -0.42
DDX56-209ENST00000473924 CTSKP43235 329 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 STC1P52823 247 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 THOP1P52888 689 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 BNC1Q01954 994 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 PDE1CQ14123 709 aaPredicted RBP12.41□□□□□ -0.42
DDX56-209ENST00000473924 SPARCL1Q14515 664 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 INPP5AQ14642 412 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 HLA-BQ31612 363 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 LRRK1Q38SD2 2015 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 UAP1L1Q3KQV9 507 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 CCDC137Q6PK04 289 aaKnown RBP12.41□□□□□ -0.42
DDX56-209ENST00000473924 C4orf22Q6V702 233 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 LYSMD3Q7Z3D4 306 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 PRUNE1Q86TP1 453 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 DCP2Q8IU60 420 aaKnown RBP12.41□□□□□ -0.42
DDX56-209ENST00000473924 PDCD7Q8N8D1 485 aaKnown RBP12.41□□□□□ -0.42
DDX56-209ENST00000473924 OR2I1PQ8NGU4 316 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 BLOC1S5Q8TDH9 187 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 DTD2Q96FN9 168 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 C16orf45Q96MC5 204 aaPredicted RBP12.41□□□□□ -0.42
DDX56-209ENST00000473924 ETNK1Q9HBU6 452 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 RAB6BQ9NRW1 208 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 PKD2L2Q9NZM6 624 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 HACD3Q9P035 362 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 FEZ2Q9UHY8 353 aaPredicted RBP12.41□□□□□ -0.42
DDX56-209ENST00000473924 CD84Q9UIB8 345 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 ZNF711Q9Y462 761 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 FAM186AA6NE01 2351 aa12.41□□□□□ -0.42
DDX56-209ENST00000473924 C4orf47A7E2U8 309 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 ERI2A8K979 691 aaKnown RBP12.4□□□□□ -0.42
DDX56-209ENST00000473924 TOR1BO14657 336 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 DFNA5O60443 496 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 PHF2O75151 1096 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 ZSCAN5DPP0CG00 497 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 GM2AP17900 193 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 RPL22P35268 128 aaKnown RBP12.4□□□□□ -0.42
DDX56-209ENST00000473924 ADRA1AP35348 466 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 COILP38432 576 aaPredicted RBP12.4□□□□□ -0.42
DDX56-209ENST00000473924 PFN3P60673 137 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 YPEL5P62699 121 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 BASP1P80723 227 aaKnown RBP12.4□□□□□ -0.42
DDX56-209ENST00000473924 MTM1Q13496 603 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 OLIG2Q13516 323 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 PTK2BQ14289 1009 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 CDKN3Q16667 212 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 CYP1B1Q16678 543 aa12.4□□□□□ -0.42
DDX56-209ENST00000473924 PRAMEF14Q5SWL7 426 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms