RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	HS6ST1	O60243	411 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	BEST1	O76090	585 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	NKX2-2	O95096	273 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	NDUFB8	O95169	186 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	SRPRA	P08240	638 aa	Known RBP	4.77	□□□□□ -1.65
BBX-223	ENST00000473542	FGF2	P09038	288 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	CLTB	P09497	229 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	HOXB6	P17509	224 aa	Known RBP	4.77	□□□□□ -1.65
BBX-223	ENST00000473542	PIK3CA	P42336	1068 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	MMP13	P45452	471 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	ME1	P48163	572 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	TMPRSS3	P57727	454 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	CALD1	Q05682	793 aa	Known RBP	4.77	□□□□□ -1.65
BBX-223	ENST00000473542	LRMP	Q12912	555 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	NAE1	Q13564	534 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	RBMS2	Q15434	407 aa	Known RBP	4.77	□□□□□ -1.65
BBX-223	ENST00000473542	NAB2	Q15742	525 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	MFSD4B	Q5TF39	518 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	DCAF12L2	Q5VW00	463 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	SHC4	Q6S5L8	630 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	KRBA2	Q6ZNG9	492 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	TSPAN33	Q86UF1	283 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	MB21D2	Q8IYB1	491 aa	Predicted RBP	4.77	□□□□□ -1.65
BBX-223	ENST00000473542	ZNF570	Q96NI8	536 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	FCRL4	Q96PJ5	515 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	SH3GL2	Q99962	352 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	CATSPERB	Q9H7T0	1116 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	LTB4R2	Q9NPC1	389 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.77	□□□□□ -1.65
BBX-223	ENST00000473542	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.77	□□□□□ -1.65
BBX-223	ENST00000473542	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.77	□□□□□ -1.65
BBX-223	ENST00000473542	GIMAP4	Q9NUV9	329 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.77	□□□□□ -1.65
BBX-223	ENST00000473542	OGFR	Q9NZT2	677 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	UBA2	Q9UBT2	640 aa	Predicted RBP	4.77	□□□□□ -1.65
BBX-223	ENST00000473542	STON1	Q9Y6Q2	735 aa		4.77	□□□□□ -1.65
BBX-223	ENST00000473542	TMEM272	A0A1B0GTI8	110 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	BTBD18	B2RXH4	712 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	TCERG1	O14776	1098 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	LDB2	O43679	373 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	JRK	O75564	520 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	ERAL1	O75616	437 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	GJB3	O75712	270 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	RGS11	O94810	467 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	SOX30	O94993	753 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	BMP15	O95972	392 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	TMEM191B	P0C7N4	346 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	CBSL	P0DN79	551 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	GCH1	P30793	250 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	HOXC9	P31274	260 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	CBS	P35520	551 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	EIF2D	P41214	584 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	CAMP	P49913	170 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	MRPL12	P52815	198 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	MRPS34	P82930	218 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	ACSM2A	Q08AH3	577 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	NEDD9	Q14511	834 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	NTRK2	Q16620	822 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	ZSCAN23	Q3MJ62	389 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	PXDC1	Q5TGL8	231 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	ACSM2B	Q68CK6	577 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	METTL2B	Q6P1Q9	378 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	CFAP77	Q6ZQR2	320 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	MTSS1L	Q765P7	747 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	MON1B	Q7L1V2	547 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	PALB2	Q86YC2	1186 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	EPHX4	Q8IUS5	362 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	POC5	Q8NA72	575 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	INPP5D	Q92835	1189 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	MOAP1	Q96BY2	351 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	RRNAD1	Q96FB5	475 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	METTL2A	Q96IZ6	378 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	PPP1R13B	Q96KQ4	1090 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	SLF1	Q9BQI6	1058 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	MMTAG2	Q9BU76	263 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	MXD3	Q9BW11	206 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	ISCU	Q9H1K1	167 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	CWC15	Q9P013	229 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	SEC63	Q9UGP8	760 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	RPS6KA6	Q9UK32	745 aa		4.76	□□□□□ -1.65
BBX-223	ENST00000473542	EXO1	Q9UQ84	846 aa	Known RBP	4.76	□□□□□ -1.65
BBX-223	ENST00000473542	LY6G6E	A0A0G2JKS1	128 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	IGLV5-39	A0A0G2JS06	123 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	ADRB2	P07550	413 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	CYP19A1	P11511	503 aa	Predicted RBP	4.75	□□□□□ -1.65
BBX-223	ENST00000473542	PRF1	P14222	555 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	IL7R	P16871	459 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	MAOA	P21397	527 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	SAT1	P21673	171 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	PON1	P27169	355 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	SLC15A1	P46059	708 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	METAP2	P50579	478 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
BBX-223	ENST00000473542	PMS2	P54278	862 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	TAS2R40	P59535	323 aa		4.75	□□□□□ -1.65
BBX-223	ENST00000473542	IFI35	P80217	286 aa	Predicted RBP	4.75	□□□□□ -1.65
BBX-223	ENST00000473542	SORD	Q00796	357 aa		4.75	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms