RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SRLQ86TD4 932 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 PIM3Q86V86 326 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 ZNF354CQ86Y25 554 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 PGBD5Q8N414 524 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 OR6C4Q8NGE1 309 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 CTRCQ99895 268 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 TUBGCP2Q9BSJ2 902 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 SEPT10Q9P0V9 454 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 UBA2Q9UBT2 640 aaPredicted RBP9.63□□□□□ -0.87
MCF2L-223ENST00000473345 B4GALT6Q9UBX8 382 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 HPCAL4Q9UM19 191 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 MRPS18BQ9Y676 258 aaKnown RBP9.63□□□□□ -0.87
MCF2L-223ENST00000473345 BLACEA4D250 179 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 ZSCAN5CA6NGD5 496 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-223ENST00000473345 STMND1H3BQB6 276 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 TNFRSF10CO14798 259 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 RAD1O60671 282 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 FGFR1OPO95684 399 aaKnown RBP9.62□□□□□ -0.87
MCF2L-223ENST00000473345 MBD3O95983 291 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 HOXC4P09017 264 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-223ENST00000473345 FURINP09958 794 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 PRKAR1AP10644 381 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 GPD1P21695 349 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 CASRP41180 1078 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 PAPOLAP51003 745 aaKnown RBP9.62□□□□□ -0.87
MCF2L-223ENST00000473345 GSCP56915 257 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-223ENST00000473345 YBEYP58557 167 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-223ENST00000473345 ARHGEF7Q14155 803 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 PPP1R15BQ5SWA1 713 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 BRAT1Q6PJG6 821 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 SLC30A9Q6PML9 568 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 MON1BQ7L1V2 547 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 SLFN11Q7Z7L1 901 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 TSPAN33Q86UF1 283 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 TRIM74Q86UV6 250 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 HEATR4Q86WZ0 1026 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 HCAR2Q8TDS4 363 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 ZDHHC1Q8WTX9 485 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 CASKIN2Q8WXE0 1202 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 TMEM159Q96B96 161 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 ZNF641Q96N77 438 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-223ENST00000473345 TAAR9Q96RI9 348 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 NCAPGQ9BPX3 1015 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 TEX101Q9BY14 249 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 STK33Q9BYT3 514 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 TRIM7Q9C029 511 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 B3GNT4Q9C0J1 378 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 ADNPQ9H2P0 1102 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 RETREG1Q9H6L5 497 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 CARS2Q9HA77 564 aaKnown RBP9.62□□□□□ -0.87
MCF2L-223ENST00000473345 TAB2Q9NYJ8 693 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 MOSPD1Q9UJG1 213 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 PILRAQ9UKJ1 303 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 SUFUQ9UMX1 484 aa9.62□□□□□ -0.87
MCF2L-223ENST00000473345 UTP20O75691 2785 aaKnown RBP9.62□□□□□ -0.87
MCF2L-223ENST00000473345 ARHGEF17Q96PE2 2063 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-223ENST00000473345 TRBV23OR9-2A0A075B6M9 112 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 EFCAB7A8K855 629 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 CACNB4O00305 520 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-223ENST00000473345 HGSO14964 777 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-223ENST00000473345 MTSS1O43312 755 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 PEX11BO96011 259 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 PDGFAP04085 211 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 ELFN1P0C7U0 828 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 KRT3P12035 628 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 MYCLP1P12525 358 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-223ENST00000473345 PRKCSHP14314 528 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-223ENST00000473345 XPAP23025 273 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-223ENST00000473345 CD82P27701 267 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 ETV3P41162 512 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 GNPDA1P46926 289 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 UQCRFS1P47985 274 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 SUOXP51687 545 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 CDK3Q00526 305 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 CTBSQ01459 385 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 RAD51Q06609 339 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 CLEC16AQ2KHT3 1053 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 PARP15Q460N3 678 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 SCYL2Q6P3W7 929 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 TMEM135Q86UB9 458 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 CACNA2D3Q8IZS8 1091 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 MIB2Q96AX9 1013 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 RTP4Q96DX8 246 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 ABHD17AQ96GS6 310 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 TUBGCP5Q96RT8 1024 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 AGAP2Q99490 1192 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 CDH19Q9H159 772 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 WDR26Q9H7D7 661 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 NLRC4Q9NPP4 1024 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 TMEM51Q9NW97 253 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 TAS2R14Q9NYV8 317 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 PDP2Q9P2J9 529 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 TMEM98Q9Y2Y6 226 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
MCF2L-223ENST00000473345 CFAP69A5D8W1 941 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 NPIPB15A6NHN6 443 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-223ENST00000473345 SIGLEC16A6NMB1 481 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 RHPN2P1A8MT19 583 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 HEXIM1O94992 359 aaKnown RBP9.6□□□□□ -0.87
MCF2L-223ENST00000473345 SFTPCP11686 197 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms