RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 HAUS6Q7Z4H7 955 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 AMZ2Q86W34 360 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 CD302Q8IX05 232 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 DHX40Q8IX18 779 aaKnown RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 CLYBLQ8N0X4 340 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 TC2NQ8N9U0 490 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 CHURC1Q8WUH1 139 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 RAPGEF4Q8WZA2 1011 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 ANKRD7Q92527 254 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 KAT2AQ92830 837 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 TPD52L3Q96J77 140 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 PIWIL1Q96J94 861 aaKnown RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 PPP1R10Q96QC0 940 aaKnown RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 MTMR9Q96QG7 549 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 PARK7Q99497 189 aaKnown RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 ZSCAN5AQ9BUG6 496 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 KIFC3Q9BVG8 833 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 GPR61Q9BZJ8 451 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 POLR1EQ9GZS1 481 aaKnown RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 MS4A7Q9GZW8 240 aaPredicted RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 RAB33BQ9H082 229 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 PNNQ9H307 717 aaKnown RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 ZNF552Q9H707 407 aaPredicted RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 TMEM165Q9HC07 324 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 PRMT8Q9NR22 394 aaPredicted RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 TMLHEQ9NVH6 421 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 HCN3Q9P1Z3 774 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 CFAP97Q9P2B7 532 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 DKK4Q9UBT3 224 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 FBXL17Q9UF56 701 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 GMEB2Q9UKD1 530 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 R3HDM2Q9Y2K5 976 aaKnown RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 COA3Q9Y2R0 106 aaPredicted RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 U3KQV3 271 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 OVOS2A0A0G2JMS6 1433 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 OVOS2A0A0J9YW53 1432 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 OVOS2Q6IE36 1432 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 YTHDC2Q9H6S0 1430 aaKnown RBP6.05□□□□□ -1.44
RTF1-203ENST00000473214 COL24A1Q17RW2 1714 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 ABCC11Q96J66 1382 aa6.05□□□□□ -1.44
RTF1-203ENST00000473214 TOPAZ1Q8N9V7 1692 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 WNK3Q9BYP7 1800 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 ACEP12821 1306 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 MYO3BQ8WXR4 1341 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 MYBBP1AQ9BQG0 1328 aaKnown RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 A0A087WWL8 130 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 TEX13CA0A0J9YWL9 993 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 PRAMEF22A3QJZ6 481 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 OR6C74A6NCV1 312 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 MFSD2BA6NFX1 497 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 PRR33A8MZF0 331 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 RSPH10B2B2RC85 870 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 H0Y8G0 127 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 H0YHG0 523 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 GOLGA8SH3BPF8 625 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 H7C4K7 107 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 EIF3DO15371 548 aaKnown RBP eCLIP6.04□□□□□ -1.44
RTF1-203ENST00000473214 MED7O43513 233 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 SCGB2A1O75556 95 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 KLHL18O94889 574 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 UNC5CO95185 931 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 GBAP04062 536 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 URODP06132 367 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 LIPFP07098 398 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 INHBBP09529 407 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 RSPH10BP0C881 870 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 TROVE2P10155 538 aaKnown RBP eCLIP6.04□□□□□ -1.44
RTF1-203ENST00000473214 THRBP10828 461 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 COX7A2P14406 83 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 KCNJ1P48048 391 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 SLC11A2P49281 568 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 GPR15P49685 360 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 UCP3P55916 312 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 PER3P56645 1201 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 MAP3K7CLP57077 242 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 CSNK2BP67870 215 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 POU6F2P78424 691 aaPredicted RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 ABATP80404 500 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 CEBPZQ03701 1054 aaKnown RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 ARHGEF7Q14155 803 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 GIT2Q14161 759 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 KCNAB1Q14722 419 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 RAB3GAP1Q15042 981 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 TAF1BQ53T94 588 aaPredicted RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 FSCBQ5H9T9 825 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 NOMO2Q5JPE7 1267 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 RTP2Q5QGT7 225 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 SPATA46Q5T0L3 261 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 SFMBT2Q5VUG0 894 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 PRAMEF18Q5VWM3 479 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 DPY19L2P1Q6NXN4 242 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 NEK5Q6P3R8 708 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 ERICH5Q6P6B1 374 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 DBX2Q6ZNG2 339 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 TRAPPC11Q7Z392 1133 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 TMCO2Q7Z6W1 182 aaPredicted RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 LUZP1Q86V48 1076 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 IQCHQ86VS3 1027 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 PROSER1Q86XN7 944 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 GLB1L2Q8IW92 636 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms