RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 A0A1W2PPH5 198 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 DENND3A2RUS2 1198 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 TTC36A6NLP5 189 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 PRR23D1E9PI22 279 aaPredicted RBP6.8□□□□□ -1.32
SGCE-210ENST00000472326 PRR23D2P0DMB1 279 aaPredicted RBP6.8□□□□□ -1.32
SGCE-210ENST00000472326 MAOAP21397 527 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 METAP2P50579 478 aaKnown RBP eCLIP6.8□□□□□ -1.32
SGCE-210ENST00000472326 FOXD4Q12950 439 aaPredicted RBP6.8□□□□□ -1.32
SGCE-210ENST00000472326 JAKMIP3Q5VZ66 844 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 CDC73Q6P1J9 531 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 TAOK1Q7L7X3 1001 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 SPATA6LQ8N4H0 392 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 SPATA20Q8TB22 786 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 SLC41A2Q96JW4 573 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 PPM1MQ96MI6 270 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 DUX5Q96PT3 197 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 FAM110AQ9BQ89 295 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 SLC26A6Q9BXS9 759 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 PPP1R3EQ9H7J1 279 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 HINT3Q9NQE9 182 aaKnown RBP6.8□□□□□ -1.32
SGCE-210ENST00000472326 SMARCAL1Q9NZC9 954 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 PSAT1Q9Y617 370 aa6.8□□□□□ -1.32
SGCE-210ENST00000472326 EME2A4GXA9 379 aaPredicted RBP6.79□□□□□ -1.32
SGCE-210ENST00000472326 NPIPB15A6NHN6 443 aaPredicted RBP6.79□□□□□ -1.32
SGCE-210ENST00000472326 CLGNO14967 610 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 SLC16A5O15375 505 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 FTCDO95954 541 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 SNRNP70P08621 437 aaKnown RBP6.79□□□□□ -1.32
SGCE-210ENST00000472326 LINC00271P0C7V0 271 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 IL7RP16871 459 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 RGS2P41220 211 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 KRTAP10-9P60411 292 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 DCTN2Q13561 401 aaKnown RBP6.79□□□□□ -1.32
SGCE-210ENST00000472326 SPATA22Q8NHS9 363 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 NEK9Q8TD19 979 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 PSPC1Q8WXF1 523 aaKnown RBP6.79□□□□□ -1.32
SGCE-210ENST00000472326 SPRY4Q9C004 299 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 PRKRIP1Q9H875 184 aaPredicted RBP6.79□□□□□ -1.32
SGCE-210ENST00000472326 ZNF556Q9HAH1 456 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 ZNF224Q9NZL3 707 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 C1RLQ9NZP8 487 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 SIX4Q9UIU6 781 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 HAO1Q9UJM8 370 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 ERVK-11Q9UQG0 969 aa6.79□□□□□ -1.32
SGCE-210ENST00000472326 UTYO14607 1347 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 MAGEA13PA6NCF6 341 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 HNRNPCL2B2RXH8 293 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 MID1O15344 667 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 HOXB5P09067 269 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 SRCP12931 536 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 PIP4K2AP48426 406 aaPredicted RBP6.78□□□□□ -1.32
SGCE-210ENST00000472326 RARSP54136 660 aaKnown RBP6.78□□□□□ -1.32
SGCE-210ENST00000472326 DRAP1Q14919 205 aaPredicted RBP6.78□□□□□ -1.32
SGCE-210ENST00000472326 CTF1Q16619 201 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 TSSK4Q6SA08 328 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 WDR63Q8IWG1 891 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 ZNF441Q8N8Z8 693 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 PCYOX1LQ8NBM8 494 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 OR2AK2Q8NG84 335 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 IL17FQ96PD4 163 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 C1QTNF5Q9BXJ0 243 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 LRRC4Q9HBW1 653 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 MMP25Q9NPA2 562 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 TMEM98Q9Y2Y6 226 aa6.78□□□□□ -1.32
SGCE-210ENST00000472326 CCR9P51686 369 aa6.77□□□□□ -1.33
SGCE-210ENST00000472326 NLRP5P59047 1200 aa6.77□□□□□ -1.33
SGCE-210ENST00000472326 TMEM115Q12893 351 aaPredicted RBP6.77□□□□□ -1.33
SGCE-210ENST00000472326 TNFAIP1Q13829 316 aa6.77□□□□□ -1.33
SGCE-210ENST00000472326 TSTQ16762 297 aaKnown RBP6.77□□□□□ -1.33
SGCE-210ENST00000472326 FAM76BQ5HYJ3 339 aa6.77□□□□□ -1.33
SGCE-210ENST00000472326 METTL2BQ6P1Q9 378 aaKnown RBP6.77□□□□□ -1.33
SGCE-210ENST00000472326 METTL2AQ96IZ6 378 aaKnown RBP6.77□□□□□ -1.33
SGCE-210ENST00000472326 ZNF385AQ96PM9 386 aaKnown RBP6.77□□□□□ -1.33
SGCE-210ENST00000472326 SCPEP1Q9HB40 452 aa6.77□□□□□ -1.33
SGCE-210ENST00000472326 ASAH2Q9NR71 780 aa6.77□□□□□ -1.33
SGCE-210ENST00000472326 A0A0G2JPF8 293 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 EIF3CLB5ME19 914 aaKnown RBP6.76□□□□□ -1.33
SGCE-210ENST00000472326 HNRNPCL3B7ZW38 293 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 HNRNPCL1O60812 293 aaKnown RBP6.76□□□□□ -1.33
SGCE-210ENST00000472326 RFPL2O75678 378 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 RTN3O95197 1032 aaPredicted RBP6.76□□□□□ -1.33
SGCE-210ENST00000472326 HNRNPCL4P0DMR1 293 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 ELF1P32519 619 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 KRT9P35527 623 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 FRG1Q14331 258 aaKnown RBP6.76□□□□□ -1.33
SGCE-210ENST00000472326 TBCEQ15813 527 aaPredicted RBP6.76□□□□□ -1.33
SGCE-210ENST00000472326 RGMBQ6NW40 437 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 CCNI2Q6ZMN8 369 aaPredicted RBP6.76□□□□□ -1.33
SGCE-210ENST00000472326 PQLC2Q6ZP29 291 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 SATL1Q86VE3 508 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 CHERPQ8IWX8 916 aaKnown RBP6.76□□□□□ -1.33
SGCE-210ENST00000472326 ODF3L1Q8IXM7 274 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 DIS3L2Q8IYB7 885 aaKnown RBP6.76□□□□□ -1.33
SGCE-210ENST00000472326 WFIKKN2Q8TEU8 576 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 PERPQ96FX8 193 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 TMEM19Q96HH6 336 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 PKP4Q99569 1192 aa6.76□□□□□ -1.33
SGCE-210ENST00000472326 IFIH1Q9BYX4 1025 aaKnown RBP6.76□□□□□ -1.33
SGCE-210ENST00000472326 TTC7AQ9ULT0 858 aaPredicted RBP6.76□□□□□ -1.33
SGCE-210ENST00000472326 FAM237AA0A1B0GTK4 181 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms