RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 KAT7O95251 611 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 CD160O95971 181 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 COL9A1P20849 921 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 DRD1P21728 446 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 MAGEA12P43365 314 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 HNRNPH2P55795 449 aaKnown RBP17.54■□□□□ 0.4
HSPG2-208ENST00000471322 NEPROQ6NW34 567 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 DCLK2Q8N568 766 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 CCDC197Q8NCU1 140 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 SPOCK2Q92563 424 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 ZNF75CPQ92670 426 aaPredicted RBP17.54■□□□□ 0.4
HSPG2-208ENST00000471322 FAM111AQ96PZ2 611 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 MCMBPQ9BTE3 642 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 MARK1Q9P0L2 795 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 CHD5Q8TDI0 1954 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 K7EQS6 105 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 CRTAMO95727 393 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 PENKP01210 267 aaPredicted RBP17.53■□□□□ 0.4
HSPG2-208ENST00000471322 GSTA1P08263 222 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 MAPK8P45983 427 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 SERPINB4P48594 390 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 NUMBP49757 651 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 LRRC32Q14392 662 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 DBN1Q16643 649 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 C2orf27AQ580R0 203 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 FOXR1Q6PIV2 292 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 PLCD4Q9BRC7 762 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 FGFR1OP2Q9NVK5 253 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.53■□□□□ 0.4
HSPG2-208ENST00000471322 SLC2A6Q9UGQ3 507 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 ACTL7AQ9Y615 435 aa17.53■□□□□ 0.4
HSPG2-208ENST00000471322 CCDC78A2IDD5 438 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 H0Y858 1186 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 BIRC5O15392 142 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 APODP05090 189 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 ARNTP27540 789 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 RPS9P46781 194 aaKnown RBP17.52■□□□□ 0.4
HSPG2-208ENST00000471322 RGRP47804 291 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 DGKGP49619 791 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 RHOAP61586 193 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 AP1S1P61966 158 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 PDE1CQ14123 709 aaPredicted RBP17.52■□□□□ 0.4
HSPG2-208ENST00000471322 ITIH4Q14624 930 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 GRAMD4Q6IC98 578 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 NCEH1Q6PIU2 408 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 TSSK4Q6SA08 328 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 LINGO4Q6UY18 593 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 GALNT7Q86SF2 657 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 LCA5Q86VQ0 697 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 ZC3HC1Q86WB0 502 aaKnown RBP17.52■□□□□ 0.4
HSPG2-208ENST00000471322 PHTF2Q8N3S3 785 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 C2CD4AQ8NCU7 369 aaPredicted RBP17.52■□□□□ 0.4
HSPG2-208ENST00000471322 RPLP0P6Q8NHW5 317 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 VPS39Q96JC1 886 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 GPR22Q99680 433 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 ELAC2Q9BQ52 826 aaKnown RBP17.52■□□□□ 0.4
HSPG2-208ENST00000471322 TDRD1Q9BXT4 1180 aaKnown RBP17.52■□□□□ 0.4
HSPG2-208ENST00000471322 CHRDQ9H2X0 955 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 MANSC1Q9H8J5 431 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 SNX15Q9NRS6 342 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 LHX3Q9UBR4 397 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 RAI2Q9Y5P3 530 aa17.52■□□□□ 0.4
HSPG2-208ENST00000471322 LDB2O43679 373 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 SNX3O60493 162 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 GJB3O75712 270 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 NEFHP12036 1026 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 GRIA2P42262 883 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 CSNK1DP48730 415 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 ACVR1Q04771 509 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 LMAN2Q12907 356 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 DGKKQ5KSL6 1271 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 CDHR3Q6ZTQ4 885 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 C1orf210Q8IVY1 113 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 PRSS33Q8NF86 280 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 RAB3IL1Q8TBN0 382 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 WFDC5Q8TCV5 224 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 STYXQ8WUJ0 223 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 RMDN1Q96DB5 314 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 ERLEC1Q96DZ1 483 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 ABCB8Q9NUT2 735 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 FBXO5Q9UKT4 447 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 CHKBQ9Y259 395 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 MTO1Q9Y2Z2 717 aaKnown RBP17.51■□□□□ 0.39
HSPG2-208ENST00000471322 STARD13Q9Y3M8 1113 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 HCN4Q9Y3Q4 1203 aa17.51■□□□□ 0.39
HSPG2-208ENST00000471322 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-208ENST00000471322 PRRT4C9JH25 899 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 GOLGA8TH3BQL2 631 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 KLF11O14901 512 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 GALR2O43603 387 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-208ENST00000471322 AHSGP02765 367 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 CISD3P0C7P0 127 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 TIE1P35590 1138 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 EIF2DP41214 584 aaKnown RBP17.5■□□□□ 0.39
HSPG2-208ENST00000471322 CD151P48509 253 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 PRAMEP78395 509 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 GALNT3Q14435 633 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 ANGPT1Q15389 498 aa17.5■□□□□ 0.39
HSPG2-208ENST00000471322 SMAD1Q15797 465 aaKnown RBP17.5■□□□□ 0.39
HSPG2-208ENST00000471322 PLEKHG6Q3KR16 790 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms