RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CYP2A6P11509 494 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-211ENST00000471260 KRT10P13645 584 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 MAN1A1P33908 653 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 ACTN2P35609 894 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 GARSP41250 739 aaKnown RBP13.53□□□□□ -0.24
HMGN1-211ENST00000471260 SEMG2Q02383 582 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 DPYSL3Q14195 570 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 ERCC6LQ2NKX8 1250 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 ALG11Q2TAA5 492 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 ASTE1Q2TB18 679 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-211ENST00000471260 GUSBP11Q6P575 273 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 EFL1Q7Z2Z2 1120 aaKnown RBP13.53□□□□□ -0.24
HMGN1-211ENST00000471260 HID1Q8IV36 788 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 CBARPQ8N350 705 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-211ENST00000471260 PGBD5Q8N414 524 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 ARL10Q8N8L6 244 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 KCTD6Q8NC69 237 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 OR56A4Q8NGH8 313 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 FGF11Q92914 225 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 TSACCQ96A04 125 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-211ENST00000471260 FAF2Q96CS3 445 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 SCRN2Q96FV2 425 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 NSMCE3Q96MG7 304 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 RBM15Q96T37 977 aaKnown RBP eCLIP13.53□□□□□ -0.24
HMGN1-211ENST00000471260 POLR1EQ9GZS1 481 aaKnown RBP13.53□□□□□ -0.24
HMGN1-211ENST00000471260 NOD2Q9HC29 1040 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 B4GALT6Q9UBX8 382 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 OR1A2Q9Y585 309 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 ASXL3Q9C0F0 2248 aa13.52□□□□□ -0.24
HMGN1-211ENST00000471260 RRP8O43159 456 aaKnown RBP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 DXOO77932 396 aaKnown RBP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 ZRANB2O95218 330 aaKnown RBP eCLIP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 PGLSO95336 258 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 CPP00450 1065 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 TMEM253P0C7T8 217 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 MYF5P13349 255 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 MX2P20592 715 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 CCNCP24863 283 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 VIPR1P32241 457 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 EIF2S3P41091 472 aaKnown RBP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 ARHGAP25P42331 645 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 GALNT2Q10471 571 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 ACOX1Q15067 660 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 IFI16Q16666 785 aaKnown RBP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 COL28A1Q2UY09 1125 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 TBC1D25Q3MII6 688 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 ANKRD20A8PQ5CZ79 823 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 ARMC12Q5T9G4 340 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 NCBP2-AS2Q69YL0 99 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 ALG1LQ6GMV1 187 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 PNCKQ6P2M8 343 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 C19orf48Q6RUI8 117 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 LRRC69Q6ZNQ3 347 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 USP45Q70EL2 814 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 VSIG1Q86XK7 387 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 SLC35F3Q8IY50 421 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 RAVER1Q8IY67 606 aaKnown RBP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 PLA2G15Q8NCC3 412 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 PCDH19Q8TAB3 1148 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 PDCD6IPQ8WUM4 868 aaKnown RBP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 HNRNPLLQ8WVV9 542 aaKnown RBP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 MAML1Q92585 1016 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 FUBP1Q96AE4 644 aaKnown RBP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 COQ10AQ96MF6 247 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 ZNF578Q96N58 590 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 TSGA13Q96PP4 275 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 MCCC1Q96RQ3 725 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-211ENST00000471260 ZMYND15Q9H091 742 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 PADI4Q9UM07 663 aa13.52□□□□□ -0.25
HMGN1-211ENST00000471260 CCDC151A5D8V7 595 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 ZNF487B1APH4 448 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 MATN3O15232 486 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 AKR1B10O60218 316 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 BRINP1O60477 761 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 CSO75390 466 aaKnown RBP13.51□□□□□ -0.25
HMGN1-211ENST00000471260 HEXIM1O94992 359 aaKnown RBP13.51□□□□□ -0.25
HMGN1-211ENST00000471260 CD48P09326 243 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 GM2AP17900 193 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 TGM2P21980 687 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 TEAD1P28347 426 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 LSSP48449 732 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 MAXP61244 160 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 TRAF2Q12933 501 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 MMRN1Q13201 1228 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 ARHGEF7Q14155 803 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 NAA30Q147X3 362 aaPredicted RBP13.51□□□□□ -0.25
HMGN1-211ENST00000471260 BRD3Q15059 726 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 CNGA3Q16281 694 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 ISXQ2M1V0 245 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 ATP13A4Q4VNC1 1196 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 IGF2-ASQ6U949 168 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 RAD9BQ6WBX8 426 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 RBM44Q6ZP01 1051 aaKnown RBP13.51□□□□□ -0.25
HMGN1-211ENST00000471260 RD3Q7Z3Z2 195 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 PDZD3Q86UT5 571 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 RHOT2Q8IXI1 618 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 NUS1Q96E22 293 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 CCDC42Q96M95 316 aa13.51□□□□□ -0.25
HMGN1-211ENST00000471260 WDR24Q96S15 920 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms