RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 NAB1Q13506 487 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 DEFB115Q30KQ5 88 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 PITRM1Q5JRX3 1037 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 HABP4Q5JVS0 413 aaKnown RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 POTEHQ6S545 545 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 IZUMO2Q6UXV1 221 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ZYG11AQ6WRX3 759 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 GK5Q6ZS86 529 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ZBTB8BQ8NAP8 495 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 LPCAT1Q8NF37 534 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ABTB1Q969K4 478 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 CASD1Q96PB1 797 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 HBEGFQ99075 208 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ZBED2Q9BTP6 218 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 RNF38Q9H0F5 515 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 MUC3BQ9H195 1237 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 TMEM161AQ9NX61 479 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 STX18Q9P2W9 335 aaKnown RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 TRIM17Q9Y577 477 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 RAD54BQ9Y620 910 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 HEATR9A2RTY3 570 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 IQCF5A8MTL0 148 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 HDAC3O15379 428 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 KLHL2O95198 593 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 KLKB1P03952 638 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 PIK3R1P27986 724 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ECT2LQ008S8 904 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 UGP2Q16851 508 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ST13P5Q8NFI4 369 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 ARRDC2Q8TBH0 407 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 STYXQ8WUJ0 223 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 NSUN5Q96P11 429 aaKnown RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 GPR78Q96P69 363 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 KCNA7Q96RP8 456 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 SLC22A12Q96S37 553 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 SLC39A3Q9BRY0 314 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 TTPALQ9BTX7 342 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 TRIM62Q9BVG3 475 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 UNC93B1Q9H1C4 597 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 MRPL46Q9H2W6 279 aaKnown RBP9.45□□□□□ -0.9
TOP3A-203ENST00000469739 TREX1Q9NSU2 369 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 WDR37Q9Y2I8 494 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 SPO11Q9Y5K1 396 aa9.45□□□□□ -0.9
TOP3A-203ENST00000469739 SLC38A8A6NNN8 435 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 ARVCFO00192 962 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 MATN2O00339 956 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 SEC24AO95486 1093 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 ANPEPP15144 967 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 CTPS1P17812 591 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 TWF1Q12792 350 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 PFKFB4Q16877 469 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.44□□□□□ -0.9
TOP3A-203ENST00000469739 ST13P4Q8IZP2 240 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-203ENST00000469739 OR4K2Q8NGD2 314 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 MPP4Q96JB8 637 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 ATP13A1Q9HD20 1204 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 PRDM5Q9NQX1 630 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-203ENST00000469739 GMPR2Q9P2T1 348 aaKnown RBP9.44□□□□□ -0.9
TOP3A-203ENST00000469739 ZNF212Q9UDV6 495 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 CDH22Q9UJ99 828 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 VWA7Q9Y334 891 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 RAP2CQ9Y3L5 183 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 PTPRDP23468 1912 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 GREB1Q4ZG55 1949 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 PATJQ8NI35 1801 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 A0A0J9YVX5 310 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-203ENST00000469739 ARHGEF37A1IGU5 675 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 UBXN8O00124 270 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 HNRNPCL1O60812 293 aaKnown RBP9.44□□□□□ -0.9
TOP3A-203ENST00000469739 CABYRO75952 493 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 AOC1P19801 751 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 MAGEA12P43365 314 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 C1QTNF8P60827 252 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 CDK18Q07002 472 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 NOGQ13253 232 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 TRIP4Q15650 581 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-203ENST00000469739 FAM83EQ2M2I3 478 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 UMODL1-AS1Q8N2C9 162 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 CARNMT1Q8N4J0 409 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 C2CD4AQ8NCU7 369 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-203ENST00000469739 C8orf48Q96LL4 319 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 DRC3Q9H069 523 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 NDE1Q9NXR1 346 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 ADA2Q9NZK5 511 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 GALPQ9UBC7 116 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 CDYLQ9Y232 598 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 BTRCQ9Y297 605 aa9.44□□□□□ -0.9
TOP3A-203ENST00000469739 NLRC5Q86WI3 1866 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 KNL1Q8NG31 2342 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 MYOFQ9NZM1 2061 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 A8MT66 165 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 K7ERQ8 282 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 OR1I1O60431 355 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 SUPT3HO75486 399 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 PABPC4LP0CB38 370 aaKnown RBP9.43□□□□□ -0.9
TOP3A-203ENST00000469739 SLC2A3P11169 496 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 ZNF24P17028 368 aa9.43□□□□□ -0.9
TOP3A-203ENST00000469739 CORO1AP31146 461 aaKnown RBP9.43□□□□□ -0.9
TOP3A-203ENST00000469739 ATP5C1P36542 298 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms