RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 BCAT2O15382 392 aaPredicted RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 YKT6O15498 198 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 TLX3O43711 291 aaPredicted RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 USO1O60763 962 aaKnown RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 LARGE1O95461 756 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 VNN2O95498 520 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 AFPP02771 609 aaKnown RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 HNRNPCP07910 306 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS8-219ENST00000469479 PRR23D2P0DMB1 279 aaPredicted RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 HOXB2P14652 356 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 GABRG2P18507 467 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 CYP3A5P20815 502 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 U2AF2P26368 475 aaKnown RBP eCLIP4.97□□□□□ -1.615e-7■■□□□ 13.1
VPS8-219ENST00000469479 CHMLP26374 656 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 MPGP29372 298 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 LRPAP1P30533 357 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 OXTRP30559 389 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 NTSR1P30989 418 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 CCKARP32238 428 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 OPRD1P41143 372 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 MMP13P45452 471 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 CCR10P46092 362 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 ANXA11P50995 505 aaKnown RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 RPL10AP62906 217 aaKnown RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 CCT2P78371 535 aaKnown RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 PPP3CAQ08209 521 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 HLXQ14774 488 aaPredicted RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 NFE2Q16621 373 aaPredicted RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 MUM1Q2TAK8 710 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 HLA-BQ31612 363 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 TBC1D25Q3MII6 688 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 CD300EQ496F6 205 aaPredicted RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 SLC39A12Q504Y0 691 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 EMC10Q5UCC4 262 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 NCAPH2Q6IBW4 605 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 DSTYKQ6XUX3 929 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 ZNF66Q6ZN08 573 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 METTL23Q86XA0 190 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 DDX42Q86XP3 938 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS8-219ENST00000469479 KRT73Q86Y46 540 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 RAB11FIP4Q86YS3 637 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 DCP1BQ8IZD4 617 aaKnown RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 THEM5Q8N1Q8 247 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 ATAD1Q8NBU5 361 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 B3GALNT2Q8NCR0 500 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 SNX19Q92543 992 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 KIFAP3Q92845 792 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 GJA10Q969M2 543 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 IGSF8Q969P0 613 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 OTUB2Q96DC9 234 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 PBKQ96KB5 322 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 ZNF578Q96N58 590 aaPredicted RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 HSD17B14Q9BPX1 270 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 ADI1Q9BV57 179 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 IL25Q9H293 177 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 TUBA8Q9NY65 449 aaPredicted RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 RGL1Q9NZL6 768 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 TBC1D14Q9P2M4 693 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 ORC3Q9UBD5 711 aaPredicted RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 ARHGAP26Q9UNA1 814 aa4.97□□□□□ -1.61
VPS8-219ENST00000469479 RUVBL1Q9Y265 456 aaKnown RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 TNRC6BQ9UPQ9 1833 aaKnown RBP4.97□□□□□ -1.61
VPS8-219ENST00000469479 SHROOM3Q8TF72 1996 aa4.96□□□□□ -1.61
VPS8-219ENST00000469479 TLN1Q9Y490 2541 aaKnown RBP4.96□□□□□ -1.61
VPS8-219ENST00000469479 LRBAP50851 2863 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 PI4KAP42356 2102 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 PLXNB3Q9ULL4 1909 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 ARID2Q68CP9 1835 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 FAM149AA5PLN7 773 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 TBC1D3BA6NDS4 549 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 KIAA0391O15091 583 aaKnown RBP4.96□□□□□ -1.62
VPS8-219ENST00000469479 NPC1O15118 1278 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 PAPSS1O43252 624 aaPredicted RBP4.96□□□□□ -1.62
VPS8-219ENST00000469479 EDIL3O43854 480 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 SLITRK3O94933 977 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 TUBB4AP04350 444 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 OR4Q2P0C623 313 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 IFNAR1P17181 557 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 XBP1P17861 261 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 ATF6P18850 670 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 DRD4P21917 467 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 CD6P30203 668 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 PPP3CCP48454 512 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 ERVPABLB-1P60509 514 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 ASIC1P78348 528 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 CCDC173Q0VFZ6 552 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 DMP1Q13316 513 aaPredicted RBP4.96□□□□□ -1.62
VPS8-219ENST00000469479 MTM1Q13496 603 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 CTTNQ14247 550 aaKnown RBP4.96□□□□□ -1.62
VPS8-219ENST00000469479 C21orf62-AS1Q17RA5 79 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 ZNF260Q3ZCT1 412 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 PLAC9Q5JTB6 97 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 TXNDC8Q6A555 127 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 DHRS13Q6UX07 377 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 ERICH1Q86X53 443 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 ADGRG5Q8IZF4 528 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 BLIDQ8IZY5 108 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 LEO1Q8WVC0 666 aaPredicted RBP4.96□□□□□ -1.62
VPS8-219ENST00000469479 SKA1Q96BD8 255 aa4.96□□□□□ -1.62
VPS8-219ENST00000469479 EIF2AK1Q9BQI3 630 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms