RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 MKLN1Q9UL63 735 aa3.39□□□□□ -1.87
SOX2-OT-204ENST00000469278 CORO1CQ9ULV4 474 aaPredicted RBP3.39□□□□□ -1.87
SOX2-OT-204ENST00000469278 A4GNTQ9UNA3 340 aa3.39□□□□□ -1.87
SOX2-OT-204ENST00000469278 GPR34Q9UPC5 381 aa3.39□□□□□ -1.87
SOX2-OT-204ENST00000469278 CARD8Q9Y2G2 431 aa3.39□□□□□ -1.87
SOX2-OT-204ENST00000469278 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.39□□□□□ -1.87
SOX2-OT-204ENST00000469278 LYVE1Q9Y5Y7 322 aa3.39□□□□□ -1.87
SOX2-OT-204ENST00000469278 PIAS3Q9Y6X2 628 aa3.39□□□□□ -1.87
SOX2-OT-204ENST00000469278 KDM3AQ9Y4C1 1321 aa3.39□□□□□ -1.87
SOX2-OT-204ENST00000469278 IGKV3D-20A0A0C4DH25 116 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 FAM237BA0A1B0GVD1 139 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 A6NCN8 305 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 MYO1GB0I1T2 1018 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 USP17L23D6RBM5 183 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 PTGES3LE9PB15 166 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 FIBPO43427 364 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 TSPAN9O75954 239 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 F7P08709 466 aaPredicted RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 UNGP13051 313 aaPredicted RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 LAMP2P13473 410 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 AZU1P20160 251 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 RGS2P41220 211 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 GABRB2P47870 512 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 EFNA5P52803 228 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 SNX16P57768 344 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 ABATP80404 500 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 TRAF2Q12933 501 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 CRYMQ14894 314 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 WTAPQ15007 396 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 SLC39A14Q15043 492 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 DNTTIP2Q5QJE6 756 aaKnown RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 CFAP58Q5T655 872 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 FAM205BPQ63HN1 556 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 TSSK4Q6SA08 328 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 KDELC2Q7Z4H8 507 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 TDRPQ86YL5 185 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 RPAP2Q8IXW5 612 aaPredicted RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 TEX11Q8IYF3 940 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 ZCCHC9Q8N567 271 aaKnown RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 TTC39CQ8N584 583 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 C1orf131Q8NDD1 294 aaKnown RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 ZMIZ2Q8NF64 920 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 USP6NLQ92738 828 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 NCAPGQ9BPX3 1015 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 MAK16Q9BXY0 300 aaKnown RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 ITPAQ9BY32 194 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 LHPPQ9H008 270 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 MAP6D1Q9H9H5 199 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 WDR6Q9NNW5 1121 aaKnown RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 BPIFA1Q9NP55 256 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 SPATS2LQ9NUQ6 558 aaKnown RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 HCFC1R1Q9NWW0 138 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 NSMCE4AQ9NXX6 385 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 HAO1Q9UJM8 370 aa3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 ZNF215Q9UL58 517 aaPredicted RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 AAR2Q9Y312 384 aaKnown RBP3.38□□□□□ -1.87
SOX2-OT-204ENST00000469278 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 A0A1W2PQM1 296 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 CBY3A6NI87 242 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 B4DLN1 442 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 BMPR1BO00238 502 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 DOK2O60496 412 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 PTP4A3O75365 173 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 SEC31AO94979 1220 aaKnown RBP3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 EIF2S1P05198 315 aaKnown RBP3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 CTPS1P17812 591 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 TTKP33981 857 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 KRT2P35908 639 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 PBX3P40426 434 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 NOVP48745 357 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 RASSF2P50749 326 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 PRAMEP78395 509 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 CHAF1BQ13112 559 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 CUL4AQ13619 759 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 ARHGEF6Q15052 776 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 RNPS1Q15287 305 aaKnown RBP3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 MEA1Q16626 185 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 KIF19Q2TAC6 998 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 FNBP1LQ5T0N5 605 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 HEPHL1Q6MZM0 1159 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 TAGAPQ8N103 731 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 C17orf53Q8N3J3 647 aaPredicted RBP3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 ZNF485Q8NCK3 441 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 TMEM116Q8NCL8 245 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 OR4N2Q8NGD1 307 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 CEP76Q8TAP6 659 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 TMEM170AQ8WVE7 144 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 ADAMTS14Q8WXS8 1223 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 ARHGEF2Q92974 986 aaKnown RBP3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 CALML4Q96GE6 196 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 NEUROD6Q96NK8 337 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 B3GNT4Q9C0J1 378 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 MUC13Q9H3R2 512 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 KIF9Q9HAQ2 790 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 FBRSL1Q9HCM7 1045 aaKnown RBP3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 SLC6A13Q9NSD5 602 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 DLGAP2Q9P1A6 1054 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 SEL1LQ9UBV2 794 aa3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 ADD3Q9UEY8 706 aaKnown RBP3.37□□□□□ -1.87
SOX2-OT-204ENST00000469278 COL2A1P02458 1487 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms