RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 TMC2Q8TDI7 906 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 KHSRPQ92945 711 aaKnown RBP eCLIP9.98□□□□□ -0.81
NUP50-214ENST00000469163 TOE1Q96GM8 510 aaKnown RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 DMRTB1Q96MA1 342 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 EPS8L2Q9H6S3 715 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 NUP50Q9UKX7 468 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 PCOLCE2Q9UKZ9 415 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 CNTNAP2Q9UHC6 1331 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 A0A1W2PQJ5 194 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 CENPXA8MT69 81 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 PLK4O00444 970 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 MDM4O15151 490 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 PI15O43692 258 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 CDH16O75309 829 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 MICAL2O94851 1124 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 SORBS2O94875 1100 aaKnown RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 H6PDO95479 791 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 MYL2P10916 166 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 UQCRC1P31930 480 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 TTKP33981 857 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 ALDH3B2P48448 385 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 ALG1LQ6GMV1 187 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 PRSS55Q6UWB4 352 aaPredicted RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 STK32CQ86UX6 486 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 JOSD2Q8TAC2 188 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 SLC7A14Q8TBB6 771 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 RFFLQ8WZ73 363 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 LPGAT1Q92604 370 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 PHF21AQ96BD5 680 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 TBC1D20Q96BZ9 403 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 PPP1R36Q96LQ0 422 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 ZNF641Q96N77 438 aaPredicted RBP9.98□□□□□ -0.81
NUP50-214ENST00000469163 CPXM1Q96SM3 734 aa9.98□□□□□ -0.81
NUP50-214ENST00000469163 MAP1BP46821 2468 aaKnown RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 ARHGEF37A1IGU5 675 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 CLDN25C9JDP6 229 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 TRDMT1O14717 391 aaKnown RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 NDUFS6O75380 124 aaKnown RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 GPR32O75388 356 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 ASS1P00966 412 aaKnown RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 IDUAP35475 653 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 CDH6P55285 790 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 CTBSQ01459 385 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 STX3Q13277 289 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 Q3ZCU0 254 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 ZBED5Q49AG3 693 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 LRRC8DQ7L1W4 858 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 SYTL1Q8IYJ3 562 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 TPCN2Q8NHX9 752 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 NAA50Q9GZZ1 169 aaKnown RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 POLR3BQ9NW08 1133 aaPredicted RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 PAQR5Q9NXK6 330 aaPredicted RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 ZNF221Q9UK13 617 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 TLK1Q9UKI8 766 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 TCRBV7S2A1N4TA0A589 114 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 RPL10P27635 214 aaKnown RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 RBL1P28749 1068 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 RPA3P35244 121 aaPredicted RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 NUDT1P36639 197 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 ITKQ08881 620 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 SURF1Q15526 300 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 CASC4Q6P4E1 433 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 PRPF39Q86UA1 669 aaKnown RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 LHFPL5Q8TAF8 219 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 URGCPQ8TCY9 931 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 OXNAD1Q96HP4 312 aaPredicted RBP9.97□□□□□ -0.81
NUP50-214ENST00000469163 DNAJC28Q9NX36 388 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 PKD2L2Q9NZM6 624 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 PADI4Q9UM07 663 aa9.97□□□□□ -0.81
NUP50-214ENST00000469163 FAM187AA6NFU0 413 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 PRPSAP2O60256 369 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 IL18RAPO95256 599 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 MAGP20916 626 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 CYP2F1P24903 491 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 HOXC13P31276 330 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 NR1H3Q13133 447 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 SLC13A2Q13183 592 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 TRIM25Q14258 630 aaKnown RBP9.96□□□□□ -0.81
NUP50-214ENST00000469163 ZNF267Q14586 743 aaPredicted RBP9.96□□□□□ -0.81
NUP50-214ENST00000469163 ZFP69Q49AA0 526 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 OVOS1Q6IE37 1185 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 ARSKQ6UWY0 536 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.96□□□□□ -0.81
NUP50-214ENST00000469163 KRT77Q7Z794 578 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 HID1Q8IV36 788 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 PHC2Q8IXK0 858 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 SHC3Q92529 594 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 TSEN34Q9BSV6 310 aaKnown RBP9.96□□□□□ -0.81
NUP50-214ENST00000469163 ZNF518BQ9C0D4 1074 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 HMG20AQ9NP66 347 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 SSU72P8A0A1W2PR75 194 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 CES2O00748 559 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 NOS1APO75052 506 aaPredicted RBP9.96□□□□□ -0.81
NUP50-214ENST00000469163 RALAP11233 206 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 CAPZA2P47755 286 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 LILRA4P59901 499 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 YWHAEP62258 255 aaKnown RBP9.96□□□□□ -0.81
NUP50-214ENST00000469163 CDKL1Q00532 357 aa9.96□□□□□ -0.81
NUP50-214ENST00000469163 SEMA3AQ14563 771 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms