RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 SYNCRIPO60506 623 aaKnown RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 RNF40O75150 1001 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 F7P08709 466 aaPredicted RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 LHCGRP22888 699 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 MRPS21P82921 87 aaKnown RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 PDE1BQ01064 536 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 TNFAIP8L3Q5GJ75 292 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 KCTD16Q68DU8 428 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 SDE2Q6IQ49 451 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 USP45Q70EL2 814 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 PARS2Q7L3T8 475 aaKnown RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 PTAR1Q7Z6K3 402 aaPredicted RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 SLC26A11Q86WA9 606 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 RASSF3Q86WH2 238 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 GOLGA6L1Q8N7Z2 621 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 PNPLA1Q8N8W4 532 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 OR6P1Q8NGX9 317 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 CDKL2Q92772 493 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 SRPK1Q96SB4 655 aaKnown RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 RSPH9Q9H1X1 276 aaPredicted RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 PPCSQ9HAB8 311 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 PCDH12Q9NPG4 1184 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 NDRG2Q9UN36 371 aaKnown RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 CCDC162PA2VCL2 907 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 KRBA1A5PL33 1030 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 UPK3BL1B0FP48 263 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 UPK3BL2E5RIL1 263 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 MAN2B1O00754 1011 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 STX7O15400 261 aaKnown RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 RGS16O15492 202 aaPredicted RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 SLC7A4O43246 635 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 RPP40O75818 363 aaKnown RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 GOT2P00505 430 aaKnown RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 ITGB7P26010 798 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 COPAP53621 1224 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 SATB1Q01826 763 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 RASA2Q15283 850 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 FBXO43Q4G163 708 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 LRRC66Q68CR7 880 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 NEPROQ6NW34 567 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 ZNF852Q6ZMS4 543 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 MARK2Q7KZI7 788 aaKnown RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 DSG4Q86SJ6 1040 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 CROCCP2Q86T23 111 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 RPLP0P6Q8NHW5 317 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 CD248Q9HCU0 757 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 MED4Q9NPJ6 270 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 POLR3BQ9NW08 1133 aaPredicted RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 PSMC3IPQ9P2W1 217 aaPredicted RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 WNT16Q9UBV4 365 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 LGALS13Q9UHV8 139 aa12.84□□□□□ -0.35
RUNX1-213ENST00000469087 MTF2Q9Y483 593 aaPredicted RBP12.84□□□□□ -0.35
RUNX1-213ENST00000469087 INHBAP08476 426 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 CHRNB1P11230 501 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 HOXB2P14652 356 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 COL9A1P20849 921 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 PSMD8P48556 350 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 PRAMEP78395 509 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 GPS2Q13227 327 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 CTBP1Q13363 440 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 HSP90B2PQ58FF3 399 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 FBXL19Q6PCT2 694 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 PACS1Q6VY07 963 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 DENND6AQ8IWF6 608 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 CNTN4Q8IWV2 1026 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 ATP6V1G3Q96LB4 118 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 MKRN2Q9H000 416 aaKnown RBP12.83□□□□□ -0.36
RUNX1-213ENST00000469087 MFSD1Q9H3U5 465 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 FKBPLQ9UIM3 349 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 ZNF180Q9UJW8 692 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 NOVA2Q9UNW9 492 aaKnown RBP12.83□□□□□ -0.36
RUNX1-213ENST00000469087 PKP3Q9Y446 797 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 IKBKGQ9Y6K9 419 aa12.83□□□□□ -0.36
RUNX1-213ENST00000469087 HMX2A2RU54 273 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 GOLGA8CPA6NN73 597 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 C1QTNF3-AMACRE9PGA6 284 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 MID1O15344 667 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 AHSGP02765 367 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 XPAP23025 273 aaPredicted RBP12.82□□□□□ -0.36
RUNX1-213ENST00000469087 GABRB3P28472 473 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 DRD3P35462 400 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 HADHAP40939 763 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 XIAPP98170 497 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 PRKCQQ04759 706 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 PEX6Q13608 980 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 THOC5Q13769 683 aaKnown RBP12.82□□□□□ -0.36
RUNX1-213ENST00000469087 CST6Q15828 149 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 AGBL2Q5U5Z8 902 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 RFLNAQ6ZTI6 216 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 ERN2Q76MJ5 926 aaKnown RBP12.82□□□□□ -0.36
RUNX1-213ENST00000469087 TRMT11Q7Z4G4 463 aaKnown RBP12.82□□□□□ -0.36
RUNX1-213ENST00000469087 STRA8Q7Z7C7 330 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 CBARPQ8N350 705 aaPredicted RBP12.82□□□□□ -0.36
RUNX1-213ENST00000469087 RIBC1Q8N443 379 aaPredicted RBP12.82□□□□□ -0.36
RUNX1-213ENST00000469087 OR2T3Q8NH03 318 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 OR4L1Q8NH43 312 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 PPP1R16AQ96I34 528 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 CPNE1Q99829 537 aa12.82□□□□□ -0.36
RUNX1-213ENST00000469087 ARHGEF3Q9NR81 526 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms