RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 OVGP1Q12889 678 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 LRRC14Q15048 493 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 WSCD2Q2TBF2 565 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 SIRPB2Q5JXA9 342 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 FAXCQ5TGI0 409 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 DENND2CQ68D51 928 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 TTC27Q6P3X3 843 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 CCDC137Q6PK04 289 aaKnown RBP11.96□□□□□ -0.49
VPS13D-204ENST00000469054 LAYNQ6UX15 382 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 C4orf22Q6V702 233 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 GCNT7Q6ZNI0 430 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 HSD11B1LQ7Z5J1 315 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 ABI3BPQ7Z7G0 1075 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 IQCHQ86VS3 1027 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 RAVER1Q8IY67 606 aaKnown RBP11.96□□□□□ -0.49
VPS13D-204ENST00000469054 TAB3Q8N5C8 712 aaPredicted RBP11.96□□□□□ -0.49
VPS13D-204ENST00000469054 TP53I13Q8NBR0 393 aaPredicted RBP11.96□□□□□ -0.49
VPS13D-204ENST00000469054 LRRC45Q96CN5 670 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 KLHDC7BQ96G42 594 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 ZFYVE1Q9HBF4 777 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 FSCN3Q9NQT6 498 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 MBNL1Q9NR56 388 aaKnown RBP11.96□□□□□ -0.49
VPS13D-204ENST00000469054 FEZ2Q9UHY8 353 aaPredicted RBP11.96□□□□□ -0.49
VPS13D-204ENST00000469054 ANKRD6Q9Y2G4 727 aa11.96□□□□□ -0.49
VPS13D-204ENST00000469054 LNP1A1A4G5 178 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 POM121BA6NF01 834 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 ERI2A8K979 691 aaKnown RBP11.95□□□□□ -0.5
VPS13D-204ENST00000469054 H0Y8X5 98 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 TLR4O00206 839 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 PDE2AO00408 941 aaPredicted RBP11.95□□□□□ -0.5
VPS13D-204ENST00000469054 MAGEC1O60732 1142 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 AP2A1O95782 977 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 TUBB4AP04350 444 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 C1SP09871 688 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 PIRTP0C851 137 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 ENGP17813 658 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 IGFALSP35858 605 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 ETV3P41162 512 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 FNTAP49354 379 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 BNC1Q01954 994 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 GRIK2Q13002 908 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 SPARCL1Q14515 664 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 KIF19Q2TAC6 998 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 KYAT3Q6YP21 454 aaKnown RBP11.95□□□□□ -0.5
VPS13D-204ENST00000469054 Q6ZVL8 140 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 TECPR1Q7Z6L1 1165 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
VPS13D-204ENST00000469054 CCHCR1Q8TD31 782 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 EID2BQ96D98 161 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 DTD2Q96FN9 168 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 TBL1YQ9BQ87 522 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 APOL2Q9BQE5 337 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 ZDHHC5Q9C0B5 715 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 TRABDQ9H4I3 376 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 LRRC40Q9H9A6 602 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 RAB6BQ9NRW1 208 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 RXFP3Q9NSD7 469 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 SHOC2Q9UQ13 582 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 ZNF711Q9Y462 761 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.95□□□□□ -0.5
VPS13D-204ENST00000469054 SPAG17Q6Q759 2223 aa11.95□□□□□ -0.5
VPS13D-204ENST00000469054 A6NNZ2 444 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 TOR1BO14657 336 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 USP12O75317 370 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 KRT14P02533 472 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 THEGLP0DJG4 465 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 CTSKP43235 329 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 RABIFP47224 123 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 SPINT3P49223 89 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 ATXN3P54252 364 aaPredicted RBP11.94□□□□□ -0.5
VPS13D-204ENST00000469054 NXPH1P58417 271 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 PFN3P60673 137 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 OLIG2Q13516 323 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 SEMA5AQ13591 1074 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 INPP5AQ14642 412 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 IRF4Q15306 451 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 AASDHQ4L235 1098 aaPredicted RBP11.94□□□□□ -0.5
VPS13D-204ENST00000469054 DENND5AQ6IQ26 1287 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 IL27RAQ6UWB1 636 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 Q6ZSR6 202 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 RFLNAQ6ZTI6 216 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 LYSMD3Q7Z3D4 306 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 TMC3Q7Z5M5 1100 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 NLRP8Q86W28 1048 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 KIAA2013Q8IYS2 634 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 NRSN1Q8IZ57 195 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 OR13H1Q8NG92 308 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 GRK7Q8WTQ7 553 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 NUS1Q96E22 293 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 GPR63Q9BZJ6 419 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 DDX47Q9H0S4 455 aaKnown RBP11.94□□□□□ -0.5
VPS13D-204ENST00000469054 ARNT2Q9HBZ2 717 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 PKD2L2Q9NZM6 624 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 HACD3Q9P035 362 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 NEU2Q9Y3R4 380 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 SPO11Q9Y5K1 396 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 SNX11Q9Y5W9 270 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 VPS13AQ96RL7 3174 aa11.94□□□□□ -0.5
VPS13D-204ENST00000469054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.93□□□□□ -0.5
VPS13D-204ENST00000469054 RGSL1A5PLK6 1076 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms