RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 DMTF1Q9Y222 760 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 ZNF711Q9Y462 761 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 TCAF1Q9Y4C2 921 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 SPO11Q9Y5K1 396 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 TEX264Q9Y6I9 313 aa11.28□□□□□ -0.6
MSH5-214ENST00000468602 SPAG17Q6Q759 2223 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 USP34Q70CQ2 3546 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 C2orf81A6NN90 581 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 METTL12A8MUP2 240 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 USP12O75317 370 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 USP1O94782 785 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 SEMA4FO95754 770 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 PYGLP06737 847 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 HOXC4P09017 264 aaPredicted RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 GSTA2P09210 222 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 LPOP22079 712 aaPredicted RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 XPAP23025 273 aaPredicted RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 ACSL1P33121 698 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 HADHAP40939 763 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 LMAN1P49257 510 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 OLIG2Q13516 323 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 SPARCL1Q14515 664 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 ZNF284Q2VY69 593 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 PEAR1Q5VY43 1037 aaPredicted RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 STEAP4Q687X5 459 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 LRRC66Q68CR7 880 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 KIAA1324Q6UXG2 1013 aaKnown RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 CCNI2Q6ZMN8 369 aaPredicted RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 LMNTD2Q8IXW0 634 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 AGGF1Q8N302 714 aaeCLIP11.27□□□□□ -0.612e-10■□□□□ 10.8
MSH5-214ENST00000468602 DNAAF3Q8N9W5 541 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 PDCD6IPQ8WUM4 868 aaKnown RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 DNASE2BQ8WZ79 361 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 FOXJ1Q92949 421 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 DTD2Q96FN9 168 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 TOE1Q96GM8 510 aaKnown RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 EBNA1BP2Q99848 306 aaKnown RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 ORAI3Q9BRQ5 295 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 TXLNGYQ9BZA5 131 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 DPH5Q9H2P9 285 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 NLE1Q9NVX2 485 aaPredicted RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 MBD1Q9UIS9 605 aaPredicted RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 ZFR2Q9UPR6 939 aaKnown RBP11.27□□□□□ -0.61
MSH5-214ENST00000468602 PLXNA2O75051 1894 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 PKD1L2Q7Z442 2459 aa11.27□□□□□ -0.61
MSH5-214ENST00000468602 WDFY4Q6ZS81 3184 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 CLDN7O95471 211 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 IGHV4-34P06331 123 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 C1SP09871 688 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 ALPIP09923 528 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 ELFN1P0C7U0 828 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 SP9P0CG40 484 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 C6P13671 934 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 TRIM23P36406 574 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 DPP6P42658 865 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 SPINT3P49223 89 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 CARSP49589 748 aaKnown RBP11.26□□□□□ -0.61
MSH5-214ENST00000468602 LIG3P49916 1009 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 PLTPP55058 493 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 MRPS25P82663 173 aaKnown RBP11.26□□□□□ -0.61
MSH5-214ENST00000468602 XIAPP98170 497 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 CSTF1Q05048 431 aaKnown RBP11.26□□□□□ -0.61
MSH5-214ENST00000468602 ARHGEF7Q14155 803 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 ANGPT1Q15389 498 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 SKIDA1Q1XH10 827 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 MSS51Q4VC12 460 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 CCDC38Q502W7 563 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 TEX35Q5T0J7 233 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 FNBP1LQ5T0N5 605 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 CERCAMQ5T4B2 595 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 TSTD2Q5T7W7 516 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 HENMT1Q5T8I9 393 aaKnown RBP11.26□□□□□ -0.61
MSH5-214ENST00000468602 KIAA0895LQ68EN5 471 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 KIAA0930Q6ICG6 404 aaPredicted RBP11.26□□□□□ -0.61
MSH5-214ENST00000468602 ESRP1Q6NXG1 681 aaKnown RBP11.26□□□□□ -0.61
MSH5-214ENST00000468602 CENPUQ71F23 418 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 LYSMD3Q7Z3D4 306 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 GLT6D1Q7Z4J2 308 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 CNPY4Q8N129 248 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.26□□□□□ -0.61
MSH5-214ENST00000468602 OR13J1Q8NGT2 312 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 OR14C36Q8NHC7 312 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 C1orf216Q8TAB5 229 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 CENPTQ96BT3 561 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 FMO2Q99518 471 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 KLF6Q99612 283 aaPredicted RBP11.26□□□□□ -0.61
MSH5-214ENST00000468602 APOL2Q9BQE5 337 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 WDR83Q9BRX9 315 aaKnown RBP11.26□□□□□ -0.61
MSH5-214ENST00000468602 TRIM31Q9BZY9 425 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 IRF2BPLQ9H1B7 796 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 GPR27Q9NS67 375 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 SMOXQ9NWM0 555 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 PKD2L2Q9NZM6 624 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 MTRF1LQ9UGC7 380 aaKnown RBP11.26□□□□□ -0.61
MSH5-214ENST00000468602 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.26□□□□□ -0.61
MSH5-214ENST00000468602 HS3ST3A1Q9Y663 406 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 FAM169AQ9Y6X4 670 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 CACNA1BQ00975 2339 aa11.26□□□□□ -0.61
MSH5-214ENST00000468602 TRBV5-4A0A0C4DH59 114 aa11.25□□□□□ -0.61
MSH5-214ENST00000468602 C1orf232A0A0U1RR37 186 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms