RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CILP2Q8IUL8 1156 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 OR13J1Q8NGT2 312 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 RIN3Q8TB24 985 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 FAM45AQ8TCE6 357 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 PBXIP1Q96AQ6 731 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 PKMYT1Q99640 499 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 SLC29A1Q99808 456 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 CIB1Q99828 191 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 ADAM2Q99965 735 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 SLC39A3Q9BRY0 314 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 OSBPL11Q9BXB4 747 aa15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 NOL11Q9H8H0 719 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 DDX18Q9NVP1 670 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 COL4A4P53420 1690 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-211ENST00000468468 F8W810 466 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 SLC7A2P52569 658 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 TXNL4AP83876 142 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 ADRM1Q16186 407 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 PITRM1Q5JRX3 1037 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 ZNF678Q5SXM1 525 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 CCSAPQ6IQ19 270 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 CYHR1Q6ZMK1 362 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 MRPL10Q7Z7H8 261 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 MYO1HQ8N1T3 1032 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 KLHDC9Q8NEP7 349 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 TSPAN14Q8NG11 270 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 PPWD1Q96BP3 646 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 IMP4Q96G21 291 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 RANBP9Q96S59 729 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 EFHD1Q9BUP0 239 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 CNOT6Q9ULM6 557 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 MTF2Q9Y483 593 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 H3BSA7 217 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 STAMBPO95630 424 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 GRIK1P39086 918 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 STX1BP61266 288 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 MAP7D1Q3KQU3 841 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 HMBOX1Q6NT76 420 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 SCD5Q86SK9 330 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 DHFR2Q86XF0 187 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 LRRC49Q8IUZ0 686 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 HDAC10Q969S8 669 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 DUS3LQ96G46 650 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 C3orf30Q96M34 536 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 KLHL5Q96PQ7 755 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 TMEM79Q9BSE2 394 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 TRMOQ9BU70 441 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 NOL6Q9H6R4 1146 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 ATP13A1Q9HD20 1204 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 GMPR2Q9P2T1 348 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 OR51F1A6NGY5 319 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 ZNF839A8K0R7 811 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 J3KR12 359 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 NELFEP18615 380 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 RENBPP51606 427 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 ARSDP51689 593 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 TMEM259Q4ZIN3 620 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 UNC50Q53HI1 259 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 TFAP2DQ7Z6R9 452 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 ISCA2Q86U28 154 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 PIM3Q86V86 326 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 TRIML2Q8N7C3 387 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 EXT2Q93063 718 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 C19orf60Q96EN9 201 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 CCT7Q99832 543 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 NMUR1Q9HB89 426 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 NOD1Q9Y239 953 aa15.81■□□□□ 0.12
TSPAN4-211ENST00000468468 BPTFQ12830 3046 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 TTC24A2A3L6 582 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 AOC2O75106 756 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 TIPRLO75663 272 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 S1PR4O95977 384 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 PEX11BO96011 259 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 MLLT6P55198 1093 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 CDH13P55290 713 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 NKX3-2P78367 333 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 PRAMEP78395 509 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 DSC2Q02487 901 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 SLC10A7Q0GE19 358 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 OVOS1Q6IE37 1185 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 C8orf82Q6P1X6 216 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 HACD2Q6Y1H2 254 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 FUNDC1Q8IVP5 155 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 SH3RF2Q8TEC5 729 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 PABPC5Q96DU9 382 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 L3HYPDHQ96EM0 354 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 HAUS8Q9BT25 410 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 CAAP1Q9H8G2 361 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 MARCH4Q9P2E8 410 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 TMCO1Q9UM00 188 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 CRYL1Q9Y2S2 319 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 A0A0U1RQF3 1178 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 SLC7A4O43246 635 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 PAPSS2O95340 614 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 PENKP01210 267 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 SLC4A1P02730 911 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 CYP11A1P05108 521 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 ITGB1P05556 798 aa15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 ALDOCP09972 364 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-211ENST00000468468 HSPA8P11142 646 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms