RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 SDK2Q58EX2 2172 aa13.1□□□□□ -0.31
PTPN7-207ENST00000468385 ARHGAP42A6NI28 874 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 RHPN2P1A8MT19 583 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 A8MX80 341 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 ECEL1O95672 775 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 CEACAM5P06731 702 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 MYCLP1P12525 358 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-207ENST00000468385 AK4P27144 223 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-207ENST00000468385 CD1CP29017 333 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 ALDH4A1P30038 563 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 POLR2LP62875 67 aaKnown RBP13.09□□□□□ -0.31
PTPN7-207ENST00000468385 OGDHQ02218 1023 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 NSUN2Q08J23 767 aaKnown RBP eCLIP13.09□□□□□ -0.31
PTPN7-207ENST00000468385 ACOX1Q15067 660 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 CA9Q16790 459 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 ARHGAP36Q6ZRI8 547 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 ARHGAP12Q8IWW6 846 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
PTPN7-207ENST00000468385 PATE1Q8WXA2 126 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 CCDC74BQ96LY2 380 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 COQ10AQ96MF6 247 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 TAAR9Q96RI9 348 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 CNPY3Q9BT09 278 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 CINPQ9BW66 212 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-207ENST00000468385 GSDMCQ9BYG8 508 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 ADNPQ9H2P0 1102 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 DONSONQ9NYP3 566 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 TAAR2Q9P1P5 351 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 B4GALT6Q9UBX8 382 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 ST14Q9Y5Y6 855 aa13.09□□□□□ -0.31
PTPN7-207ENST00000468385 ARHGEF17Q96PE2 2063 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-207ENST00000468385 TLN1Q9Y490 2541 aaKnown RBP13.08□□□□□ -0.32
PTPN7-207ENST00000468385 PDE2AO00408 941 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-207ENST00000468385 LIFP15018 202 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 UGT1A3P35503 534 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 ATP1A2P50993 1020 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 SCNN1BP51168 640 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 LIMK2P53671 638 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 ILF3Q12906 894 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTPN7-207ENST00000468385 TRA2AQ13595 282 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTPN7-207ENST00000468385 KRT31Q15323 416 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 CNGA3Q16281 694 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 BORAQ6PGQ7 559 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 HEATR4Q86WZ0 1026 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
PTPN7-207ENST00000468385 NAGSQ8N159 534 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 NUS1Q96E22 293 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 TEX101Q9BY14 249 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 FRMD8Q9BZ67 464 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-207ENST00000468385 CDH19Q9H159 772 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 SUDS3Q9H7L9 328 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-207ENST00000468385 SP110Q9HB58 689 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 TRNAU1APQ9NX07 287 aaKnown RBP13.08□□□□□ -0.32
PTPN7-207ENST00000468385 SUFUQ9UMX1 484 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 AP4E1Q9UPM8 1137 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 SIK3Q9Y2K2 1263 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 B3GALT1Q9Y5Z6 326 aa13.08□□□□□ -0.32
PTPN7-207ENST00000468385 TTC24A2A3L6 582 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-207ENST00000468385 ANKRD62A6NC57 917 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 EEF2KO00418 725 aaKnown RBP13.07□□□□□ -0.32
PTPN7-207ENST00000468385 PPM1DO15297 605 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 THRAP10827 490 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 ERCC2P18074 760 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 CSF2RBP32927 897 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 GPR3P46089 330 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 GNPDA1P46926 289 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 POLE2P56282 527 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 AP1S1P61966 158 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 CDK3Q00526 305 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 IL10RBQ08334 325 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 KCNAB2Q13303 367 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 RFTN1Q14699 578 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-207ENST00000468385 CT47A1Q5JQC4 288 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-207ENST00000468385 CDKAL1Q5VV42 579 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 NKAIN2Q5VXU1 208 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 SLC30A9Q6PML9 568 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 CBARPQ8N350 705 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-207ENST00000468385 IL22RA1Q8N6P7 574 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 NPWQ8N729 165 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 PAF1Q8N7H5 531 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 OR4D9Q8NGE8 314 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 ZNF564Q8TBZ8 553 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-207ENST00000468385 PSKH2Q96QS6 385 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 KCTD15Q96SI1 283 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-207ENST00000468385 DDA1Q9BW61 102 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 EPN3Q9H201 632 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 DHX35Q9H5Z1 703 aaKnown RBP13.07□□□□□ -0.32
PTPN7-207ENST00000468385 PHPT1Q9NRX4 125 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-207ENST00000468385 SEPT11Q9NVA2 429 aaKnown RBP13.07□□□□□ -0.32
PTPN7-207ENST00000468385 TMEM9Q9P0T7 183 aa13.07□□□□□ -0.32
PTPN7-207ENST00000468385 PTPN13Q12923 2485 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 IGHV1OR21-1A0A087WYE8 117 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 DFFAO00273 331 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 ZW10O43264 779 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 HTRA2O43464 458 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-207ENST00000468385 HEXIM1O94992 359 aaKnown RBP13.06□□□□□ -0.32
PTPN7-207ENST00000468385 MPSTP25325 297 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 ETV3P41162 512 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 POLD2P49005 469 aa13.06□□□□□ -0.32
PTPN7-207ENST00000468385 CTBSQ01459 385 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms