RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 AP1S1P61966 158 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 MPP1Q00013 466 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 DMC1Q14565 340 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 PPP4R4Q6NUP7 873 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 UNC5DQ6UXZ4 953 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 TAOK1Q7L7X3 1001 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 ZC3HC1Q86WB0 502 aaKnown RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 CHST14Q8NCH0 376 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 ELSPBP1Q96BH3 223 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 DNAJC1Q96KC8 554 aaKnown RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 ZNF317Q96PQ6 595 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 IER2Q9BTL4 223 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 CEP44Q9C0F1 390 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 MTG2Q9H4K7 406 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 CCDC134Q9H6E4 229 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 CNOT10Q9H9A5 744 aaKnown RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 ZFATQ9P243 1243 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 SLC17A7Q9P2U7 560 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 RIMKLBQ9ULI2 386 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 MTO1Q9Y2Z2 717 aaKnown RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 IQANK1A0A1B0GTG1 560 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 WASH3PC4AMC7 463 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 GAPDHSO14556 408 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 SNRPAP09012 282 aaKnown RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 DHRS4L1P0CG22 281 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 PRSS56P0CW18 603 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 KRT15P19012 456 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 LIMK2P53671 638 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 GNGT1P63211 74 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 TIAL1Q01085 375 aaKnown RBP eCLIP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 CTBP1Q13363 440 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 GRM2Q14416 872 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 LRRC14Q15048 493 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 DLG2Q15700 870 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 MYLK3Q32MK0 819 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 DPY19L3Q6ZPD9 716 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 STRA8Q7Z7C7 330 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 LPCAT1Q8NF37 534 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 BLOC1S5Q8TDH9 187 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 PTPRN2Q92932 1015 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 KXD1Q9BQD3 176 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 SELENOSQ9BQE4 189 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 MLXIPLQ9NP71 852 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 NLE1Q9NVX2 485 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 GTSE1Q9NYZ3 720 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 PPIL1Q9Y3C6 166 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 GRXCR2A6NFK2 248 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 KIAA0754O94854 1291 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 ALPIP09923 528 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 SP100P23497 879 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 GP5P40197 560 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 DGKGP49619 791 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 PDE1CQ14123 709 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 SEPT6Q14141 434 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 RBBP5Q15291 538 aaKnown RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 TAF1AQ15573 450 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 GRTP1Q5TC63 336 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 CES4AQ5XG92 561 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 Q6ZVU0 165 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 PEX13Q92968 403 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 PPP2R3CQ969Q6 453 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 HDAC10Q969S8 669 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 TBATAQ96M53 351 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 PLEKHG4BQ96PX9 1271 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 CPEB1Q9BZB8 566 aaKnown RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 MFSD1Q9H3U5 465 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 ZFP14Q9HCL3 533 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 SENP1Q9P0U3 644 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 ZMAT5Q9UDW3 170 aaKnown RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 EMCNQ9ULC0 261 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 COLQQ9Y215 455 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-208ENST00000468300 PCDHB9Q9Y5E1 797 aa8.28□□□□□ -1.08
BRCA1-208ENST00000468300 TRIOO75962 3097 aa8.27□□□□□ -1.08
BRCA1-208ENST00000468300 FAM47DPA6NHR8 397 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 ANHXE9PGG2 379 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 TPP1O14773 563 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 HAUS5O94927 633 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 INMTO95050 263 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 ADH1CP00326 375 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 FOXN2P32314 431 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 SEC24CP53992 1094 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 TMED1Q13445 227 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 PEX6Q13608 980 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 PPM1JQ5JR12 505 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 ATAT1Q5SQI0 421 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 CILP2Q8IUL8 1156 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 CHPFQ8IZ52 775 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 MTBPQ96DY7 904 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 ABCG4Q9H172 646 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 CAB39LQ9H9S4 337 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 FBRSL1Q9HCM7 1045 aaKnown RBP8.27□□□□□ -1.09
BRCA1-208ENST00000468300 CLDND1Q9NY35 253 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 MTF2Q9Y483 593 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-208ENST00000468300 WASF2Q9Y6W5 498 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 LRRK1Q38SD2 2015 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 PLXNA2O75051 1894 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 CCDC162PA2VCL2 907 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 SLC7A4O43246 635 aa8.27□□□□□ -1.09
BRCA1-208ENST00000468300 SOCS5O75159 536 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms