RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 INPP5AQ14642 412 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 IRF4Q15306 451 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 CCNG2Q16589 344 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 ZNF569Q5MCW4 686 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 PRAMEF14Q5SWL7 426 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 LRRC66Q68CR7 880 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 ESRP1Q6NXG1 681 aaKnown RBP20.03■□□□□ 0.8
NPHP4-206ENST00000468253 PNCKQ6P2M8 343 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 DRICH1Q6PGQ1 229 aaPredicted RBP20.03■□□□□ 0.8
NPHP4-206ENST00000468253 ZNF765Q7L2R6 523 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 HSD11B1LQ7Z5J1 315 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 TSPAN33Q86UF1 283 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 KLHDC8BQ8IXV7 354 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 SLC22A18ASQ8N1D0 253 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 SAP25Q8TEE9 199 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 RTP4Q96DX8 246 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 DTD2Q96FN9 168 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 OXNAD1Q96HP4 312 aaPredicted RBP20.03■□□□□ 0.8
NPHP4-206ENST00000468253 PBKQ96KB5 322 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 FAM118BQ9BPY3 351 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 APOOQ9BUR5 198 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 HOMER3Q9NSC5 361 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 TRMT1Q9NXH9 659 aaKnown RBP20.03■□□□□ 0.8
NPHP4-206ENST00000468253 RSPH14Q9UHP6 348 aa20.03■□□□□ 0.8
NPHP4-206ENST00000468253 DRG1Q9Y295 367 aaKnown RBP20.03■□□□□ 0.8
NPHP4-206ENST00000468253 FLRT2O43155 660 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 LIASO43766 372 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 CSF2P04141 144 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 TNNT3P45378 269 aaPredicted RBP20.02■□□□□ 0.8
NPHP4-206ENST00000468253 PDE1CQ14123 709 aaPredicted RBP20.02■□□□□ 0.8
NPHP4-206ENST00000468253 PTPRRQ15256 657 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 OASLQ15646 514 aaKnown RBP20.02■□□□□ 0.8
NPHP4-206ENST00000468253 PARP6Q2NL67 630 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 FAM182AQ5T1J6 154 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 Q6ZVL8 140 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 DGLUCYQ7Z3D6 616 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 FAM71DQ8N9W8 422 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 ATL2Q8NHH9 583 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 CCHCR1Q8TD31 782 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 MRGPRX2Q96LB1 330 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 TRABDQ9H4I3 376 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 UBP1Q9NZI7 540 aa20.02■□□□□ 0.8
NPHP4-206ENST00000468253 TTC7AQ9ULT0 858 aaPredicted RBP20.02■□□□□ 0.8
NPHP4-206ENST00000468253 DOCK9Q9BZ29 2069 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 PCNX2A6NKB5 2137 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 PDE2AO00408 941 aaPredicted RBP20.01■□□□□ 0.79
NPHP4-206ENST00000468253 SH3BP5O60239 455 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 PYGLP06737 847 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 HLA-DPA1P20036 260 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 HTR1BP28222 390 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 ETV3P41162 512 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 GRK6P43250 576 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 THOP1P52888 689 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 HNRNPKP61978 463 aaKnown RBP eCLIP20.01■□□□□ 0.79
NPHP4-206ENST00000468253 PCSK7Q16549 785 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 RANBP10Q6VN20 620 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 ERMP1Q7Z2K6 904 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 KDELC2Q7Z4H8 507 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 PARGQ86W56 976 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 BTN2A2Q8WVV5 523 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 NUS1Q96E22 293 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 TBATAQ96M53 351 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 SMIM14Q96QK8 99 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 CDH19Q9H159 772 aa20.01■□□□□ 0.79
NPHP4-206ENST00000468253 CEP104O60308 925 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 CBFA2T3O75081 653 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 KCNK5O95279 499 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 CLDN7O95471 211 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 FGGP02679 453 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 ITGAVP06756 1048 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 TSHRP16473 764 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 EPHA8P29322 1005 aaPredicted RBP20■□□□□ 0.79
NPHP4-206ENST00000468253 SIX1Q15475 284 aaPredicted RBP20■□□□□ 0.79
NPHP4-206ENST00000468253 P3H1Q32P28 736 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 INAVAQ3KP66 663 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 MACC1Q6ZN28 852 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 KANSL1Q7Z3B3 1105 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 TMC3Q7Z5M5 1100 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 NAXDQ8IW45 347 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 RASGEF1CQ8N431 466 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 CCDC110Q8TBZ0 833 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 CDC6Q99741 560 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 TMEM121Q9BTD3 319 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 ABCG8Q9H221 673 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 ZFYVE1Q9HBF4 777 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 RAD18Q9NS91 495 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 KCND1Q9NSA2 647 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 HACD3Q9P035 362 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 PCOLCE2Q9UKZ9 415 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 ZNF148Q9UQR1 794 aa20■□□□□ 0.79
NPHP4-206ENST00000468253 C1orf232A0A0U1RR37 186 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 GOLGA6CA6NDK9 693 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 GOLGA6BA6NDN3 693 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 ENC1O14682 589 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 TNFRSF10CO14798 259 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 PSMD3O43242 534 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 ATXN1LP0C7T5 689 aaKnown RBP19.99■□□□□ 0.79
NPHP4-206ENST00000468253 GOLGA6DP0CG33 693 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 NME1P15531 152 aaKnown RBP19.99■□□□□ 0.79
NPHP4-206ENST00000468253 KELP23276 732 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms