RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 CHMP2BQ9UQN3 213 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 MAD1L1Q9Y6D9 718 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 A0A1W2PQ67 120 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 SDR42E2A6NKP2 422 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 A8MX80 341 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 AURKAO14965 403 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 ATG13O75143 517 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 DNTTP04053 509 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 ALADP13716 330 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 TIMP2P16035 220 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 NDUFV2P19404 249 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 HNF1BP35680 557 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 ELK3P41970 407 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 RPS9P46781 194 aaKnown RBP6.88□□□□□ -1.31
SCAF4-204ENST00000467731 RPS14P62263 151 aaKnown RBP6.88□□□□□ -1.31
SCAF4-204ENST00000467731 FOXR1Q6PIV2 292 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 GLT6D1Q7Z4J2 308 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 TMC3Q7Z5M5 1100 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 ANKMY2Q8IV38 441 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 IGDCC3Q8IVU1 814 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 AADATQ8N5Z0 425 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 FBXO36Q8NEA4 188 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 AENQ8WTP8 325 aaKnown RBP6.88□□□□□ -1.31
SCAF4-204ENST00000467731 HMGB4Q8WW32 186 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 SIPA1Q96FS4 1042 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 SCRN2Q96FV2 425 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 ZNF778Q96MU6 729 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 PHACTR1Q9C0D0 580 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 SERGEFQ9UGK8 458 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 PPIL1Q9Y3C6 166 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 SPO11Q9Y5K1 396 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 TEX264Q9Y6I9 313 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 EML5Q05BV3 1969 aa6.88□□□□□ -1.31
SCAF4-204ENST00000467731 WDR87Q6ZQQ6 2873 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 A0A1W2PP55 124 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 CCDC78A2IDD5 438 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 CCDC151A5D8V7 595 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 CAPN8A6NHC0 703 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 NPIPB15A6NHN6 443 aaPredicted RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 UPK3BL1B0FP48 263 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 UPK3BL2E5RIL1 263 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 PI15O43692 258 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 KRT38O76015 456 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 SLC4A1P02730 911 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 NAT2P11245 290 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 ADRB3P13945 408 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 GABRG2P18507 467 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 C5AR1P21730 350 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 XPAP23025 273 aaPredicted RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 P2RY2P41231 377 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 ABL2P42684 1182 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 NPY2RP49146 381 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 DGKEP52429 567 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 CNTN1Q12860 1018 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 MTAPQ13126 283 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 SEPT6Q14141 434 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 FBXL19Q6PCT2 694 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 MICALCLQ6ZW33 695 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 USP45Q70EL2 814 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 ERN2Q76MJ5 926 aaKnown RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 BRSK1Q8TDC3 778 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 HCAR2Q8TDS4 363 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 C9orf72Q96LT7 481 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 HHIPQ96QV1 700 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 MCCC1Q96RQ3 725 aaPredicted RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 CDC42EP4Q9H3Q1 356 aaKnown RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 POLMQ9NP87 494 aaPredicted RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 PCDH12Q9NPG4 1184 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 CD93Q9NPY3 652 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 BATF3Q9NR55 127 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 CHRAC1Q9NRG0 131 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.87□□□□□ -1.317e-11■■■□□ 19.1
SCAF4-204ENST00000467731 SAMD15Q9P1V8 674 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 GGT7Q9UJ14 662 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 ARL5AQ9Y689 179 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 C1orf232A0A0U1RR37 186 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 EIF3HO15372 352 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 BUD23O43709 281 aaKnown RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 ERLIN1O75477 346 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 RNASEH2AO75792 299 aaKnown RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 MAGEA4P43358 317 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 NEK3P51956 506 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 PCID2Q5JVF3 399 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 UBAP2Q5T6F2 1119 aaKnown RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 PIP5KL1Q5T9C9 394 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 AGBL4Q5VU57 503 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 ANO7Q6IWH7 933 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 EMBQ6PCB8 327 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 CES3Q6UWW8 571 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 LYSMD3Q7Z3D4 306 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 TSPAN33Q86UF1 283 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 NDUFAF2Q8N183 169 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 PIAS4Q8N2W9 510 aaPredicted RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 SPEM1Q8N4L4 309 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 HDDC3Q8N4P3 179 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 PYROXD1Q8WU10 500 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 LRRC39Q96DD0 335 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 LYSMD1Q96S90 227 aa6.87□□□□□ -1.31
SCAF4-204ENST00000467731 EBNA1BP2Q99848 306 aaKnown RBP6.87□□□□□ -1.31
SCAF4-204ENST00000467731 HDAC8Q9BY41 377 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms