RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 GAGE1Q13065 139 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 GAGE4Q13068 117 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 OASLQ15646 514 aaKnown RBP4.21□□□□□ -1.74
SMC4-207ENST00000467263 ALG11Q2TAA5 492 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 ATP13A5Q4VNC0 1218 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 SLC45A4Q5BKX6 768 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 PPP6R3Q5H9R7 873 aaPredicted RBP4.21□□□□□ -1.74
SMC4-207ENST00000467263 SLC36A4Q6YBV0 504 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 HAPLN4Q86UW8 402 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 FOXRED2Q8IWF2 684 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 SPATA20Q8TB22 786 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 BICD1Q96G01 975 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 DUX5Q96PT3 197 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 SEC62Q99442 399 aaKnown RBP4.21□□□□□ -1.74
SMC4-207ENST00000467263 NDST4Q9H3R1 872 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 ZNF556Q9HAH1 456 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 PREBQ9HCU5 417 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 SLC6A13Q9NSD5 602 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 KCNS2Q9ULS6 477 aa4.21□□□□□ -1.74
SMC4-207ENST00000467263 TTC36A6NLP5 189 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 LRRC53A6NM62 1247 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 USP17L23D6RBM5 183 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 SNRNP70P08621 437 aaKnown RBP4.2□□□□□ -1.74
SMC4-207ENST00000467263 DDIT3P35638 169 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 GABRB2P47870 512 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 CASP6P55212 293 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 NAE1Q13564 534 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 FGFBP1Q14512 234 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 CTF1Q16619 201 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 GSTA3Q16772 222 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 FAM76BQ5HYJ3 339 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 MMS22LQ6ZRQ5 1243 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 TAOK1Q7L7X3 1001 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 R3HCC1LQ7Z5L2 792 aaKnown RBP4.2□□□□□ -1.74
SMC4-207ENST00000467263 TSPYL6Q8N831 410 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 IL17REQ8NFR9 667 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 NEK9Q8TD19 979 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 TANKQ92844 425 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 IL17FQ96PD4 163 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 PPP1R3EQ9H7J1 279 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 C17orf75Q9HAS0 396 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 SMARCAL1Q9NZC9 954 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 SIX4Q9UIU6 781 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 INTS6Q9UL03 887 aaKnown RBP4.2□□□□□ -1.74
SMC4-207ENST00000467263 MKLN1Q9UL63 735 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 AAR2Q9Y312 384 aaKnown RBP4.2□□□□□ -1.74
SMC4-207ENST00000467263 PSAT1Q9Y617 370 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 KDM3AQ9Y4C1 1321 aa4.2□□□□□ -1.74
SMC4-207ENST00000467263 MAGEA13PA6NCF6 341 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 MID1O15344 667 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 LINC00271P0C7V0 271 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 UBL4AP11441 157 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 CDAP32320 146 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 ICAM3P32942 547 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 ARL1P40616 181 aaPredicted RBP4.19□□□□□ -1.74
SMC4-207ENST00000467263 METAP2P50579 478 aaKnown RBP eCLIP4.19□□□□□ -1.74
SMC4-207ENST00000467263 EIF3BP55884 814 aaKnown RBP4.19□□□□□ -1.74
SMC4-207ENST00000467263 NLRP5P59047 1200 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 ZNF155Q12901 538 aaPredicted RBP4.19□□□□□ -1.74
SMC4-207ENST00000467263 G3BP1Q13283 466 aaKnown RBP eCLIP4.19□□□□□ -1.74
SMC4-207ENST00000467263 TNFAIP1Q13829 316 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 ALFQ53S48 1182 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 HSP90AB4PQ58FF6 505 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 INO80CQ6PI98 192 aaPredicted RBP4.19□□□□□ -1.74
SMC4-207ENST00000467263 CCDC13Q8IYE1 715 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 SPATA6LQ8N4H0 392 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 ZNF441Q8N8Z8 693 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 KCNG4Q8TDN1 519 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 GTF3C6Q969F1 213 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 ZNF385AQ96PM9 386 aaKnown RBP4.19□□□□□ -1.74
SMC4-207ENST00000467263 PIP5K1AQ99755 562 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 PRKRIP1Q9H875 184 aaPredicted RBP4.19□□□□□ -1.74
SMC4-207ENST00000467263 JMJD4Q9H9V9 463 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 KIF9Q9HAQ2 790 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 BRF2Q9HAW0 419 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 LRRC4Q9HBW1 653 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 HINT3Q9NQE9 182 aaKnown RBP4.19□□□□□ -1.74
SMC4-207ENST00000467263 ZNF224Q9NZL3 707 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 C1RLQ9NZP8 487 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 PGAP2Q9UHJ9 254 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 ERVK-11Q9UQG0 969 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 CEPT1Q9Y6K0 416 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 CAPN7Q9Y6W3 813 aa4.19□□□□□ -1.74
SMC4-207ENST00000467263 NOTCH3Q9UM47 2321 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 TAF1P21675 1872 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 KIF26BQ2KJY2 2108 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 A0A0G2JPF8 293 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 HNRNPCL2B2RXH8 293 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 HNRNPCL3B7ZW38 293 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 LINC01565O15544 149 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 TGFB1I1O43294 461 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 HNRNPCL1O60812 293 aaKnown RBP4.18□□□□□ -1.74
SMC4-207ENST00000467263 HNRNPCL4P0DMR1 293 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 SRCP12931 536 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 IL7RP16871 459 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 MAOAP21397 527 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 DRAP1Q14919 205 aaPredicted RBP4.18□□□□□ -1.74
SMC4-207ENST00000467263 ZNF718Q3SXZ3 478 aa4.18□□□□□ -1.74
SMC4-207ENST00000467263 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms