RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 CERCAMQ5T4B2 595 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 OGFOD3Q6PK18 319 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 SFTPA2Q8IWL1 248 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 CCL4L1Q8NHW4 92 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 NSMCE1Q8WV22 266 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 TMEM74Q96NL1 305 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 MGME1Q9BQP7 344 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 DPEP2Q9H4A9 486 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 NOD2Q9HC29 1040 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.18■□□□□ 0.66
COL9A3-206ENST00000466532 APPL1Q9UKG1 709 aa19.18■□□□□ 0.66
COL9A3-206ENST00000466532 HEXIM1O94992 359 aaKnown RBP19.17■□□□□ 0.66
COL9A3-206ENST00000466532 CYP2A6P11509 494 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-206ENST00000466532 MYCLP1P12525 358 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-206ENST00000466532 NFKBIAP25963 317 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 CCKBRP32239 447 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 SERPINB6P35237 376 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 UGT1A5P35504 534 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 MAXP61244 160 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 CFHR1Q03591 330 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 TRAF2Q12933 501 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 TSR1Q2NL82 804 aaKnown RBP19.17■□□□□ 0.66
COL9A3-206ENST00000466532 C14orf28Q4W4Y0 310 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 HGSNATQ68CP4 663 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 SPECC1LQ69YQ0 1117 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 TXNRD3NBQ6F5E7 133 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 ZNF843Q8N446 348 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 TEKT4Q8WW24 435 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 BTBD6Q96KE9 485 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 THAP2Q9H0W7 228 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 SUDS3Q9H7L9 328 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-206ENST00000466532 PCDH18Q9HCL0 1135 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 PHPT1Q9NRX4 125 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-206ENST00000466532 KCTD5Q9NXV2 234 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 LRIT1Q9P2V4 623 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 ATXN7L1Q9ULK2 861 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-206ENST00000466532 PHTF1Q9UMS5 762 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 RNF215Q9Y6U7 377 aa19.17■□□□□ 0.66
COL9A3-206ENST00000466532 HGFP14210 728 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 PNLIPP16233 465 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 ETV3P41162 512 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 MMP13P45452 471 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 CDH6P55285 790 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 CLN3Q13286 438 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 ARHGEF7Q14155 803 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 HLTFQ14527 1009 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL9A3-206ENST00000466532 ZSCAN23Q3MJ62 389 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 RALGPS1Q5JS13 557 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 MARC1Q5VT66 337 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 HSD11B1LQ7Z5J1 315 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 SPRED1Q7Z699 444 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 HEATR4Q86WZ0 1026 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 JAMLQ86YT9 394 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 NIPA2Q8N8Q9 360 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 SNRNP27Q8WVK2 155 aaKnown RBP19.16■□□□□ 0.66
COL9A3-206ENST00000466532 DTD2Q96FN9 168 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 TEX101Q9BY14 249 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 CARS2Q9HA77 564 aaKnown RBP19.16■□□□□ 0.66
COL9A3-206ENST00000466532 WDR70Q9NW82 654 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 IP6K2Q9UHH9 426 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 ANAPC7Q9UJX3 599 aa19.16■□□□□ 0.66
COL9A3-206ENST00000466532 BZW2Q9Y6E2 419 aaKnown RBP19.16■□□□□ 0.66
COL9A3-206ENST00000466532 GOLGA6CA6NDK9 693 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 GOLGA6BA6NDN3 693 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 NPIPB15A6NHN6 443 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-206ENST00000466532 K7ENP7 123 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 GOLGA6DP0CG33 693 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 LHCGRP22888 699 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 SLC5A2P31639 672 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 SLC25A11Q02978 314 aaKnown RBP19.15■□□□□ 0.66
COL9A3-206ENST00000466532 KRT81Q14533 505 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 INO80CQ6PI98 192 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-206ENST00000466532 CCDC81Q6ZN84 652 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 KIAA1524Q8TCG1 905 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 WBP1Q96G27 269 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 FUCA2Q9BTY2 467 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 NUP85Q9BW27 656 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 GOLGA6AQ9NYA3 693 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 LOXL2Q9Y4K0 774 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 PCDHGA7Q9Y5G6 932 aa19.15■□□□□ 0.66
COL9A3-206ENST00000466532 HELZ2Q9BYK8 2649 aaKnown RBP19.15■□□□□ 0.66
COL9A3-206ENST00000466532 CFAP46Q8IYW2 2715 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 A0A1W2PQJ5 194 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 PSMD11O00231 422 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 AGRPO00253 132 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 NUDT21O43809 227 aaKnown RBP19.14■□□□□ 0.65
COL9A3-206ENST00000466532 PGLSO95336 258 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 CEACAM5P06731 702 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 JMJD7P0C870 316 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 CCNB1P14635 433 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 SSR1P43307 286 aaKnown RBP19.14■□□□□ 0.65
COL9A3-206ENST00000466532 PTPRRQ15256 657 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 ARMC12Q5T9G4 340 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 RAET1GQ6H3X3 334 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 Q6ZVL8 140 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 USP45Q70EL2 814 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 CBARPQ8N350 705 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-206ENST00000466532 GPBAR1Q8TDU6 330 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 TTC9Q92623 222 aa19.14■□□□□ 0.65
COL9A3-206ENST00000466532 SYN2Q92777 582 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms