RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 GTSCR1Q86UQ5 136 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 LRRTM4Q86VH4 590 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 CHD1LQ86WJ1 897 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 HEATR4Q86WZ0 1026 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 KMT5CQ86Y97 462 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 CPOQ8IVL8 374 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.2□□□□□ -2.06
CCDC93-205ENST00000466171 SLC24A4Q8NFF2 622 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 LINS1Q8NG48 757 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 OR10V1Q8NGI7 309 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 HCAR2Q8TDS4 363 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 THAP4Q8WY91 577 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 HVCN1Q96D96 273 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 TBATAQ96M53 351 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 ZNF583Q96ND8 569 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 LITAFQ99732 161 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 LRRC1Q9BTT6 524 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 PLEKHA5Q9HAU0 1116 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 PLEKHA2Q9HB19 425 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 NOD2Q9HC29 1040 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 KCNK7Q9Y2U2 307 aa2.2□□□□□ -2.06
CCDC93-205ENST00000466171 FAM90A20PA6NIJ5 464 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 KLK10O43240 276 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 EPB41L2O43491 1005 aaKnown RBP2.19□□□□□ -2.06
CCDC93-205ENST00000466171 NDUFS7O75251 213 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 INHBAP08476 426 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 WEE2P0C1S8 567 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 PCNAP12004 261 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 TNFAIP3P21580 790 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 CHATP28329 748 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 HNRNPH1P31943 449 aaKnown RBP2.19□□□□□ -2.06
CCDC93-205ENST00000466171 TMPOP42166 694 aaKnown RBP2.19□□□□□ -2.06
CCDC93-205ENST00000466171 HOXA1P49639 335 aaPredicted RBP2.19□□□□□ -2.06
CCDC93-205ENST00000466171 UBE3AQ05086 875 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 ITGADQ13349 1161 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 TRPC3Q13507 836 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 TDGQ13569 410 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 RALBP1Q15311 655 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 SMAD1Q15797 465 aaKnown RBP2.19□□□□□ -2.06
CCDC93-205ENST00000466171 EDRF1Q3B7T1 1238 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 KCNT1Q5JUK3 1230 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 ZNF484Q5JVG2 852 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 CCNYL2Q5T2Q4 361 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 SLC35E4Q6ICL7 350 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 TRNP1Q6NT89 227 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 LCTLQ6UWM7 567 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 CEACAM20Q6UY09 585 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 ZNF497Q6ZNH5 498 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 SPAG16Q8N0X2 631 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 SRBD1Q8N5C6 995 aaKnown RBP2.19□□□□□ -2.06
CCDC93-205ENST00000466171 ESX1Q8N693 406 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 HSPH1Q92598 858 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 SDCCAG3Q96C92 435 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 C17orf77Q96MU5 243 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 ZNF599Q96NL3 588 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 SLC26A6Q9BXS9 759 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 TTC12Q9H892 705 aaPredicted RBP2.19□□□□□ -2.06
CCDC93-205ENST00000466171 C17orf75Q9HAS0 396 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 PCDH9Q9HC56 1237 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 G6PC2Q9NQR9 355 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 KLHL1Q9NR64 748 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 MCM9Q9NXL9 1143 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 SUFUQ9UMX1 484 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 DNAJC16Q9Y2G8 782 aa2.19□□□□□ -2.06
CCDC93-205ENST00000466171 A6NLC8 198 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 BLOC1S5-TXNDC5H3BN57 136 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 PEX12O00623 359 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 ANP32CO43423 234 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 PLRG1O43660 514 aaKnown RBP2.18□□□□□ -2.06
CCDC93-205ENST00000466171 CAVIN2O95810 425 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 CSF1P09603 554 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 PAX1P15863 534 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 LMOD3Q0VAK6 560 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 TBX2Q13207 712 aaPredicted RBP2.18□□□□□ -2.06
CCDC93-205ENST00000466171 ANKRD1Q15327 319 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 CTXN3Q4LDR2 81 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 ATG16L1Q676U5 607 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 ARHGAP17Q68EM7 881 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 TMED8Q6PL24 325 aaPredicted RBP2.18□□□□□ -2.06
CCDC93-205ENST00000466171 KCTD8Q6ZWB6 473 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 MAATS1Q7Z4T9 603 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.18□□□□□ -2.06
CCDC93-205ENST00000466171 TMTC1Q8IUR5 882 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 TEX19Q8NA77 164 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 MAPK1IP1LQ8NDC0 245 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 SPATA22Q8NHS9 363 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 GDPD5Q8WTR4 605 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 HERVK_113Q902F9 699 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 SH3KBP1Q96B97 665 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 KTI12Q96EK9 354 aaPredicted RBP2.18□□□□□ -2.06
CCDC93-205ENST00000466171 RRP36Q96EU6 259 aaKnown RBP2.18□□□□□ -2.06
CCDC93-205ENST00000466171 ALG14Q96F25 216 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 MPP4Q96JB8 637 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 SEC62Q99442 399 aaKnown RBP2.18□□□□□ -2.06
CCDC93-205ENST00000466171 ASCL2Q99929 193 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 REEP2Q9BRK0 252 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 HERC2P3Q9BVR0 1158 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 TWSG1Q9GZX9 223 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 UBA5Q9GZZ9 404 aa2.18□□□□□ -2.06
CCDC93-205ENST00000466171 TLR8Q9NR97 1041 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms