RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 VNN2O95498 520 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 ACADMP11310 421 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 DDX5P17844 614 aaKnown RBP4.37□□□□□ -1.71
LRCH3-211ENST00000466054 RPL3P39023 403 aaKnown RBP4.37□□□□□ -1.71
LRCH3-211ENST00000466054 MLH1P40692 756 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 PIP4K2AP48426 406 aaPredicted RBP4.37□□□□□ -1.71
LRCH3-211ENST00000466054 NAP1L1P55209 391 aaKnown RBP4.37□□□□□ -1.71
LRCH3-211ENST00000466054 ABATP80404 500 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 CSTF3Q12996 717 aaKnown RBP4.37□□□□□ -1.71
LRCH3-211ENST00000466054 DRAP1Q14919 205 aaPredicted RBP4.37□□□□□ -1.71
LRCH3-211ENST00000466054 ALG11Q2TAA5 492 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 PPP6R3Q5H9R7 873 aaPredicted RBP4.37□□□□□ -1.71
LRCH3-211ENST00000466054 C6orf141Q5SZD1 244 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 TSSK4Q6SA08 328 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 SHFQ7M4L6 423 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 SLC35F3Q8IY50 421 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 ZBTB2Q8N680 514 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 ANKRD52Q8NB46 1076 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 TMEM116Q8NCL8 245 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 HUS1BQ8NHY5 278 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 WFIKKN2Q8TEU8 576 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 OIT3Q8WWZ8 545 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 SLC41A2Q96JW4 573 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 FAM110AQ9BQ89 295 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 SCPEP1Q9HB40 452 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 CISD1Q9NZ45 108 aaKnown RBP4.37□□□□□ -1.71
LRCH3-211ENST00000466054 SLCO3A1Q9UIG8 710 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 AGO1Q9UL18 857 aaKnown RBP4.37□□□□□ -1.71
LRCH3-211ENST00000466054 MKLN1Q9UL63 735 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 MYO6Q9UM54 1294 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 PIAS3Q9Y6X2 628 aa4.37□□□□□ -1.71
LRCH3-211ENST00000466054 RUSC2Q8N2Y8 1516 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 TMEM202A6NGA9 273 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 ZBED4O75132 1171 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 RNASEH2AO75792 299 aaKnown RBP4.36□□□□□ -1.71
LRCH3-211ENST00000466054 IPO7O95373 1038 aaKnown RBP4.36□□□□□ -1.71
LRCH3-211ENST00000466054 GLUD1P00367 558 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 CGAP01215 116 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 EIF2S1P05198 315 aaKnown RBP4.36□□□□□ -1.71
LRCH3-211ENST00000466054 NFKBIAP25963 317 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 GLUD2P49448 558 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 ARF3P61204 181 aaPredicted RBP4.36□□□□□ -1.71
LRCH3-211ENST00000466054 ARF1P84077 181 aaKnown RBP4.36□□□□□ -1.71
LRCH3-211ENST00000466054 NCEH1Q6PIU2 408 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 SPATA2LQ8IUW3 424 aaPredicted RBP4.36□□□□□ -1.71
LRCH3-211ENST00000466054 WDR63Q8IWG1 891 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 FRMD1Q8N878 549 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 OR14A16Q8NHC5 309 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 POMGNT1Q8WZA1 660 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 SGCDQ92629 289 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 MMABQ96EY8 250 aaPredicted RBP4.36□□□□□ -1.71
LRCH3-211ENST00000466054 PERPQ96FX8 193 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 TMEM68Q96MH6 324 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 KIF9Q9HAQ2 790 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 TBC1D22BQ9NU19 505 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 ABI3Q9P2A4 366 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 WNT16Q9UBV4 365 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 FBXO9Q9UK97 447 aaPredicted RBP4.36□□□□□ -1.71
LRCH3-211ENST00000466054 ERVK-11Q9UQG0 969 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 LYVE1Q9Y5Y7 322 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 STON1Q9Y6Q2 735 aa4.36□□□□□ -1.71
LRCH3-211ENST00000466054 A0A1W2PQF6 199 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 LIPT2A6NK58 231 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 IFNL4K9M1U5 179 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 TIMM23O14925 209 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 ZNF432O94892 652 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 ZNF182P17025 639 aaPredicted RBP4.35□□□□□ -1.71
LRCH3-211ENST00000466054 PBX3P40426 434 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 MXI1P50539 228 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 CLNS1AP54105 237 aaKnown RBP4.35□□□□□ -1.71
LRCH3-211ENST00000466054 ECT2LQ008S8 904 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 EGR4Q05215 589 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 CRYZQ08257 329 aaKnown RBP4.35□□□□□ -1.71
LRCH3-211ENST00000466054 NIPAL4Q0D2K0 466 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 NAE1Q13564 534 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 FRG1Q14331 258 aaKnown RBP4.35□□□□□ -1.71
LRCH3-211ENST00000466054 MZT2BQ6NZ67 158 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 SARM1Q6SZW1 724 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 CYP20A1Q6UW02 462 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 MTSS1LQ765P7 747 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 ARHGAP12Q8IWW6 846 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 IQCF1Q8N6M8 205 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 PDILTQ8N807 584 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 FAM216AQ8WUB2 273 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 NEUROG1Q92886 237 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 ERGIC1Q969X5 290 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 TIGD1Q96MW7 591 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 SH3GL2Q99962 352 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 TMEM47Q9BQJ4 181 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 CHCHD6Q9BRQ6 235 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 SLC25A33Q9BSK2 321 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 ITPAQ9BY32 194 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 IFIH1Q9BYX4 1025 aaKnown RBP4.35□□□□□ -1.71
LRCH3-211ENST00000466054 TKTL2Q9H0I9 626 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 MKKSQ9NPJ1 570 aaPredicted RBP4.35□□□□□ -1.71
LRCH3-211ENST00000466054 PLSCR4Q9NRQ2 329 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 BLOC1S4Q9NUP1 217 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 CEPT1Q9Y6K0 416 aa4.35□□□□□ -1.71
LRCH3-211ENST00000466054 A0A0U1RQJ8 604 aa4.34□□□□□ -1.71
LRCH3-211ENST00000466054 FAM237AA0A1B0GTK4 181 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms