RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ZNF423Q2M1K9 1284 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 IL27RAQ6UWB1 636 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 KYAT3Q6YP21 454 aaKnown RBP11.67□□□□□ -0.54
CUX1-207ENST00000465461 IQCHQ86VS3 1027 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 NDUFAF2Q8N183 169 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 CBARPQ8N350 705 aaPredicted RBP11.67□□□□□ -0.54
CUX1-207ENST00000465461 GLIS1Q8NBF1 620 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 COG1Q8WTW3 980 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 SKA1Q96BD8 255 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 EID2BQ96D98 161 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 NUS1Q96E22 293 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 SPATA13Q96N96 652 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 WDR24Q96S15 920 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 ELF4Q99607 663 aaPredicted RBP11.67□□□□□ -0.54
CUX1-207ENST00000465461 FICDQ9BVA6 458 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 ADGRE3Q9BY15 652 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 GDF3Q9NR23 364 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 DNAAF2Q9NVR5 837 aaKnown RBP11.67□□□□□ -0.54
CUX1-207ENST00000465461 GOLGA6AQ9NYA3 693 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 PNMA8BQ9ULN7 279 aaPredicted RBP11.67□□□□□ -0.54
CUX1-207ENST00000465461 ZNF148Q9UQR1 794 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 SPO11Q9Y5K1 396 aa11.67□□□□□ -0.54
CUX1-207ENST00000465461 PIEZO1Q92508 2521 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 C1orf232A0A0U1RR37 186 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 A0A1B0GTQ1 180 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 LOC285095A0A1B0GVY8 99 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 CFAP69A5D8W1 941 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 C5orf60A6NFR6 353 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 GIPC1O14908 333 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 AURKAO14965 403 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 SH3BP5O60239 455 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 USP12O75317 370 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 STK10O94804 968 aaKnown RBP11.66□□□□□ -0.54
CUX1-207ENST00000465461 NDST3O95803 873 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 RABIFP47224 123 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 RPL26P61254 145 aaKnown RBP11.66□□□□□ -0.54
CUX1-207ENST00000465461 MPP3Q13368 585 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 FZD2Q14332 565 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 TCEA2Q15560 299 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 OASLQ15646 514 aaKnown RBP11.66□□□□□ -0.54
CUX1-207ENST00000465461 SIRPB2Q5JXA9 342 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 KCTD16Q68DU8 428 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 ITPRIPL1Q6GPH6 555 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 LYSMD3Q7Z3D4 306 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 TECPR1Q7Z6L1 1165 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 ZSCAN30Q86W11 494 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 DENND6BQ8NEG7 585 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 DEFB124Q8NES8 71 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 UBE2Q2Q8WVN8 375 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 SCAMP4Q969E2 229 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 DTD2Q96FN9 168 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 OSBPL9Q96SU4 736 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 AGAP2Q99490 1192 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 FERMT1Q9BQL6 677 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 APOOQ9BUR5 198 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 LGR4Q9BXB1 951 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 C1QTNF7Q9BXJ2 289 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 AP1M1Q9BXS5 423 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 ABCG8Q9H221 673 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 TCEAL2Q9H3H9 227 aaPredicted RBP11.66□□□□□ -0.54
CUX1-207ENST00000465461 DNAJC28Q9NX36 388 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 DLL3Q9NYJ7 618 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 KLF15Q9UIH9 416 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 RPL26L1Q9UNX3 145 aaKnown RBP11.66□□□□□ -0.54
CUX1-207ENST00000465461 BTBD3Q9Y2F9 522 aa11.66□□□□□ -0.54
CUX1-207ENST00000465461 CACNA1EQ15878 2313 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 KNL1Q8NG31 2342 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 FANCGO15287 622 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 BUD23O43709 281 aaKnown RBP11.65□□□□□ -0.54
CUX1-207ENST00000465461 MAGEC1O60732 1142 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 GCATO75600 419 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 IFNB1P01574 187 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 NFKBIAP25963 317 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 STC1P52823 247 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 GEMP55040 296 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 OVGP1Q12889 678 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 EIF2B5Q13144 721 aaKnown RBP11.65□□□□□ -0.54
CUX1-207ENST00000465461 PRPSAP1Q14558 356 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 AGERQ15109 404 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 SLC1A5Q15758 541 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 CCNG2Q16589 344 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 CCDC70Q6NSX1 233 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 PNCKQ6P2M8 343 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 ENPP7Q6UWV6 458 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 ARHGEF18Q6ZSZ5 1173 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 RBFAQ8N0V3 343 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 RASGEF1CQ8N431 466 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 PRELID2Q8N945 189 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 SETD7Q8WTS6 366 aaKnown RBP11.65□□□□□ -0.54
CUX1-207ENST00000465461 TSACCQ96A04 125 aaPredicted RBP11.65□□□□□ -0.54
CUX1-207ENST00000465461 PBKQ96KB5 322 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 LYSMD1Q96S90 227 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 RTKNQ9BST9 563 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 FSD1LQ9BXM9 530 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 BPIFA1Q9NP55 256 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 GPR27Q9NS67 375 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 PIH1D1Q9NWS0 290 aaKnown RBP11.65□□□□□ -0.54
CUX1-207ENST00000465461 UCKL1Q9NWZ5 548 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 ZNF711Q9Y462 761 aa11.65□□□□□ -0.54
CUX1-207ENST00000465461 ZNF292O60281 2723 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms