RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 MSS51Q4VC12 460 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 TEX44Q53QW1 395 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 HES3Q5TGS1 186 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 C3orf62Q6ZUJ4 267 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 CYS1Q717R9 158 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 B4GALNT4Q76KP1 1039 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 PID1Q7Z2X4 250 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 SPACA3Q8IXA5 215 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 TAB3Q8N5C8 712 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-215ENST00000465457 ARHGEF2Q92974 986 aaKnown RBP13.95□□□□□ -0.18
HDAC6-215ENST00000465457 AZIN2Q96A70 460 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 SIPA1Q96FS4 1042 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 NACA2Q9H009 215 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 HAUS2Q9NVX0 235 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 TMEM248Q9NWD8 314 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 EURLQ9NYK6 297 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 SEPT10Q9P0V9 454 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 ZC3H7BQ9UGR2 993 aaKnown RBP13.95□□□□□ -0.18
HDAC6-215ENST00000465457 RSPH14Q9UHP6 348 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 CHMP2BQ9UQN3 213 aa13.95□□□□□ -0.18
HDAC6-215ENST00000465457 RRP8O43159 456 aaKnown RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 AP2A1O95782 977 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 JUPP14923 745 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 SLC11A2P49281 568 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 HARS2P49590 506 aaKnown RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 ATP1A2P50993 1020 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 IRAK1P51617 712 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 GPX6P59796 221 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 NAB1Q13506 487 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 ENPP2Q13822 863 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 MS4A13Q5J8X5 152 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 UBAP2Q5T6F2 1119 aaKnown RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 PIK3R6Q5UE93 754 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 ZNF449Q6P9G9 518 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 HTR3DQ70Z44 454 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 CAND1Q86VP6 1230 aaKnown RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 ARHGAP12Q8IWW6 846 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 ZNF683Q8IZ20 524 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 IGSF8Q969P0 613 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 TEKT5Q96M29 485 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 EBNA1BP2Q99848 306 aaKnown RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 DDX50Q9BQ39 737 aaKnown RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 ORAI3Q9BRQ5 295 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 KLF16Q9BXK1 252 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 LRRC40Q9H9A6 602 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 SSU72Q9NP77 194 aaKnown RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 NYNRINQ9P2P1 1898 aaKnown RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 THAP10Q9P2Z0 257 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 RABGEF1Q9UJ41 708 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 NUDT5Q9UKK9 219 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 CLEC4EQ9ULY5 219 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 AAR2Q9Y312 384 aaKnown RBP13.94□□□□□ -0.18
HDAC6-215ENST00000465457 SNX10Q9Y5X0 201 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 IKBKGQ9Y6K9 419 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 BOD1L1Q8NFC6 3051 aa13.94□□□□□ -0.18
HDAC6-215ENST00000465457 ARHGAP42A6NI28 874 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 SDR42E2A6NKP2 422 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 DRGXA6NNA5 263 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 MATN3O15232 486 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 ANXA9O76027 345 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 LATS1O95835 1130 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 PSMB4P28070 264 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 CTSKP43235 329 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 GRIA4P48058 902 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 ACADVLP49748 655 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 SLC18A1P54219 525 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 YBEYP58557 167 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-215ENST00000465457 ZNF234Q14588 700 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 RTP5Q14D33 572 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 SUZ12Q15022 739 aaKnown RBP13.93□□□□□ -0.18
HDAC6-215ENST00000465457 SHBQ15464 509 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 PARP15Q460N3 678 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 TAF1BQ53T94 588 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-215ENST00000465457 RABGAP1LQ5R372 815 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 FAXCQ5TGI0 409 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 NAPEPLDQ6IQ20 393 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 ZNF534Q76KX8 674 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 ZNF771Q7L3S4 317 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-215ENST00000465457 LINC00523Q86TU6 105 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 NLRP14Q86W24 1093 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 KLHDC8BQ8IXV7 354 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 ZNF366Q8N895 744 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 GSDMBQ8TAX9 411 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 NSMCE1Q8WV22 266 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 BIRC7Q96CA5 298 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 STAMBPL1Q96FJ0 436 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 NAF1Q96HR8 494 aaKnown RBP13.93□□□□□ -0.18
HDAC6-215ENST00000465457 IL12RB2Q99665 862 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 DHRS4Q9BTZ2 278 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 CPNE5Q9HCH3 593 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 DOCK9Q9BZ29 2069 aa13.93□□□□□ -0.18
HDAC6-215ENST00000465457 TCRBV9S1A1TA0A576 114 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 F5H5T6 163 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 ERVH48-1M5A8F1 160 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 KCNK1O00180 336 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 DFFAO00273 331 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 RFPL3O75679 317 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 CCNB1P14635 433 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 PGAM1P18669 254 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 OXTRP30559 389 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms