RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 PAM16Q9Y3D7 125 aa4.45□□□□□ -1.7
PRKD3-206ENST00000464552 PCDHGB5Q9Y5G0 923 aa4.45□□□□□ -1.7
PRKD3-206ENST00000464552 RTL1A6NKG5 1358 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 CBY3A6NI87 242 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 SMTNL1A8MU46 457 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 CEP104O60308 925 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 PIP5K1CO60331 668 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 ZNF8P17098 575 aaPredicted RBP4.44□□□□□ -1.7
PRKD3-206ENST00000464552 PTPN2P17706 415 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 FMO4P31512 558 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 RPL3P39023 403 aaKnown RBP4.44□□□□□ -1.7
PRKD3-206ENST00000464552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.44□□□□□ -1.71e-13■■■■■ 63.2
PRKD3-206ENST00000464552 LSM14AQ8ND56 463 aaKnown RBP4.44□□□□□ -1.7
PRKD3-206ENST00000464552 SPATA3Q8NHX4 192 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 RFWD2Q8NHY2 731 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 STAMQ92783 540 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 ZSCAN31Q96LW9 406 aaPredicted RBP4.44□□□□□ -1.7
PRKD3-206ENST00000464552 C1QTNF4Q9BXJ3 329 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 MROH8Q9H579 483 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 GPR52Q9Y2T5 361 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 DISP2A7MBM2 1401 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 NSD3Q9BZ95 1437 aa4.44□□□□□ -1.7
PRKD3-206ENST00000464552 CD163L1Q9NR16 1453 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 RGPD5Q99666 1765 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 SRRM3A6NNA2 597 aaPredicted RBP4.43□□□□□ -1.7
PRKD3-206ENST00000464552 TIMM23O14925 209 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 CH25HO95992 272 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 TFPIP10646 304 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 SRD5A1P18405 259 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 MT3P25713 68 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 GPD2P43304 727 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 COMPP49747 757 aaPredicted RBP4.43□□□□□ -1.7
PRKD3-206ENST00000464552 PEX5P50542 639 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 CLCN5P51795 746 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 YWHAZP63104 245 aaKnown RBP4.43□□□□□ -1.7
PRKD3-206ENST00000464552 POU3F1Q03052 451 aaPredicted RBP4.43□□□□□ -1.7
PRKD3-206ENST00000464552 UBE3AQ05086 875 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 GRSF1Q12849 480 aaKnown RBP eCLIP4.43□□□□□ -1.7
PRKD3-206ENST00000464552 COASYQ13057 564 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 NAA25Q14CX7 972 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 CCDC129Q6ZRS4 1044 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.43□□□□□ -1.7
PRKD3-206ENST00000464552 ANKRD18AQ8IVF6 992 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 CCDC105Q8IYK2 499 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 LMLNQ96KR4 655 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 LRFN5Q96NI6 719 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 TESK2Q96S53 571 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 OR6C3Q9NZP0 311 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 CGNL1Q0VF96 1302 aa4.43□□□□□ -1.7
PRKD3-206ENST00000464552 COL18A1P39060 1754 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 FLT4P35916 1363 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 MYOM1P52179 1685 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 RREB1Q92766 1687 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 EP400Q96L91 3159 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 IGLV5-37A0A075B6J1 123 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 LOC102724159A0A0B4J2E5 919 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 GOLGA6L10A0A0M3HER8 536 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 PLSCR5A0PG75 271 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 TYW5A2RUC4 315 aaKnown RBP4.42□□□□□ -1.7
PRKD3-206ENST00000464552 IFITM10A6NMD0 228 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 WNT9BO14905 357 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 GAGE7O76087 117 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 GAGE12FP0CL80 117 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 GAGE12GP0CL81 117 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 GAGE12IP0CL82 117 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 PCNAP12004 261 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 HSD3B1P14060 373 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 CXCR3P49682 368 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 ERVFC1-1P60608 527 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 ECT2LQ008S8 904 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 EEF1A2Q05639 463 aaKnown RBP4.42□□□□□ -1.7
PRKD3-206ENST00000464552 GAGE1Q13065 139 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 GAGE4Q13068 117 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 SLC39A14Q15043 492 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 PWP2Q15269 919 aaKnown RBP4.42□□□□□ -1.7
PRKD3-206ENST00000464552 NUP188Q5SRE5 1749 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 ATG16L1Q676U5 607 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 ADGRG6Q86SQ4 1221 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 ZNF114Q8NC26 417 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 HERVK_113Q902F9 699 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 SNAPC3Q92966 411 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 PHF7Q9BWX1 381 aaPredicted RBP4.42□□□□□ -1.7
PRKD3-206ENST00000464552 SLC32A1Q9H598 525 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 GAREM1Q9H706 876 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 RIC8AQ9NPQ8 531 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 LRP5O75197 1615 aa4.42□□□□□ -1.7
PRKD3-206ENST00000464552 NHSQ6T4R5 1651 aa4.41□□□□□ -1.7
PRKD3-206ENST00000464552 RGPD3A6NKT7 1758 aaPredicted RBP4.41□□□□□ -1.7
PRKD3-206ENST00000464552 RGPD4Q7Z3J3 1758 aa4.41□□□□□ -1.7
PRKD3-206ENST00000464552 PABPN1LA6NDY0 278 aaKnown RBP4.41□□□□□ -1.7
PRKD3-206ENST00000464552 J3KR12 359 aa4.41□□□□□ -1.7
PRKD3-206ENST00000464552 KRT86O43790 486 aa4.41□□□□□ -1.7
PRKD3-206ENST00000464552 IGHV4-30-4P0DP06 118 aa4.41□□□□□ -1.7
PRKD3-206ENST00000464552 HOXC9P31274 260 aa4.41□□□□□ -1.7
PRKD3-206ENST00000464552 NR1H2P55055 460 aa4.41□□□□□ -1.7
PRKD3-206ENST00000464552 POU5F1BQ06416 359 aa4.41□□□□□ -1.7
PRKD3-206ENST00000464552 CHRNDQ07001 517 aa4.41□□□□□ -1.7
PRKD3-206ENST00000464552 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.41□□□□□ -1.7
PRKD3-206ENST00000464552 KRT81Q14533 505 aa4.41□□□□□ -1.7
PRKD3-206ENST00000464552 RRS1Q15050 365 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms