RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SPATS2Q86XZ4 545 aaKnown RBP14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 IPMKQ8NFU5 416 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 PPP1R2P1Q96PQ5 205 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 ERVMER34-1Q9H9K5 563 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 IL21RQ9HBE5 538 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 KCND1Q9NSA2 647 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 HOMER3Q9NSC5 361 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 KCTD5Q9NXV2 234 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 TP53BP1Q12888 1972 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 SPTBN4Q9H254 2564 aa14.52□□□□□ -0.08
SQSTM1-205ENST00000464493 TOR1BO14657 336 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 CLDN7O95471 211 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 ITGAVP06756 1048 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 ETV3P41162 512 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 YPEL5P62699 121 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 SLC14A1Q13336 389 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 INPP5AQ14642 412 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 CDKN3Q16667 212 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 PARP6Q2NL67 630 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 DRICH1Q6PGQ1 229 aaPredicted RBP14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 TECPR1Q7Z6L1 1165 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 SLC22A18ASQ8N1D0 253 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 RTP4Q96DX8 246 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 MS4A14Q96JA4 679 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 OSBPL9Q96SU4 736 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 ELF4Q99607 663 aaPredicted RBP14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 GORASP1Q9BQQ3 440 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 FSD1LQ9BXM9 530 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 MAGEE1Q9HCI5 957 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 TTC7AQ9ULT0 858 aaPredicted RBP14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 SNX12Q9UMY4 172 aa14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 DRG1Q9Y295 367 aaKnown RBP14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 FNDC3AQ9Y2H6 1198 aaKnown RBP14.52□□□□□ -0.09
SQSTM1-205ENST00000464493 ASCC3Q8N3C0 2202 aaKnown RBP14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 CABIN1Q9Y6J0 2220 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 C1orf232A0A0U1RR37 186 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 CES2O00748 559 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 METTL18O95568 372 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 PCCBP05166 539 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 ATXN1LP0C7T5 689 aaKnown RBP14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 ZNF883P0CG24 379 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 ARRB1P49407 418 aaPredicted RBP14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 STC1P52823 247 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 MTM1Q13496 603 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 PDE1CQ14123 709 aaPredicted RBP14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 SLC1A5Q15758 541 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 P3H1Q32P28 736 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 SIRPB2Q5JXA9 342 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 KDM7AQ6ZMT4 941 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 Q6ZVL8 140 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 RAVER1Q8IY67 606 aaKnown RBP14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 OXR1Q8N573 874 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 SLC25A41Q8N5S1 370 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 PLA2G15Q8NCC3 412 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 CCHCR1Q8TD31 782 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 COG1Q8WTW3 980 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 NUS1Q96E22 293 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 DTD2Q96FN9 168 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 WDR24Q96S15 920 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 SRPK1Q96SB4 655 aaKnown RBP14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 NAP1L3Q99457 506 aaPredicted RBP14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 RTKNQ9BST9 563 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 GPR27Q9NS67 375 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 TM7SF3Q9NS93 570 aa14.51□□□□□ -0.09
SQSTM1-205ENST00000464493 SPTY2D1-AS1A0A0U1RR47 76 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 A0A1B0GTQ1 180 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 GOLGA6CA6NDK9 693 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 GOLGA6BA6NDN3 693 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 TM4SF5O14894 197 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 AGTP01019 485 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 IFNB1P01574 187 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 C1SP09871 688 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 PIRTP0C851 137 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 GOLGA6DP0CG33 693 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 TCP1P17987 556 aaKnown RBP14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 HLA-DPA1P20036 260 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 ACTN2P35609 894 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 RXRGP48443 463 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 CCT8P50990 548 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 THOP1P52888 689 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 PTK2BQ14289 1009 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 SUZ12Q15022 739 aaKnown RBP14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 ESRP1Q6NXG1 681 aaKnown RBP14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 PNCKQ6P2M8 343 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 RANBP10Q6VN20 620 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 RFLNAQ6ZTI6 216 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 NRSN1Q8IZ57 195 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 PRELID2Q8N945 189 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 CCDC89Q8N998 374 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 ACTRT1Q8TDG2 376 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 APOOQ9BUR5 198 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 FICDQ9BVA6 458 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 ZFYVE1Q9HBF4 777 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 GOLGA6AQ9NYA3 693 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 DLL3Q9NYJ7 618 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 SHOC2Q9UQ13 582 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 OR1A2Q9Y585 309 aa14.5□□□□□ -0.09
SQSTM1-205ENST00000464493 RGSL1A5PLK6 1076 aa14.49□□□□□ -0.09
SQSTM1-205ENST00000464493 K7ESM1 405 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms