RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 GSDMCQ9BYG8 508 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 SLC39A8Q9C0K1 460 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 SPATS2LQ9NUQ6 558 aaKnown RBP17.31■□□□□ 0.36
HMGN1-210ENST00000464078 TUBD1Q9UJT1 453 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 SIK3Q9Y2K2 1263 aa17.31■□□□□ 0.36
HMGN1-210ENST00000464078 IGHV5-10-1A0A0J9YXX1 117 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 FGF1P05230 155 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 CCL4P13236 92 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 MAZP56270 477 aaKnown RBP17.3■□□□□ 0.36
HMGN1-210ENST00000464078 OR1D5P58170 312 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 TLE1Q04724 770 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 SQSTM1Q13501 440 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 AMZ1Q400G9 498 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 COLEC12Q5KU26 742 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 BORAQ6PGQ7 559 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 ARHGAP12Q8IWW6 846 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 CCDC112Q8NEF3 446 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 ZDHHC1Q8WTX9 485 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 NKD1Q969G9 470 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 NUS1Q96E22 293 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 CCDC74BQ96LY2 380 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 PSKH2Q96QS6 385 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 DDA1Q9BW61 102 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 CINPQ9BW66 212 aaPredicted RBP17.3■□□□□ 0.36
HMGN1-210ENST00000464078 TEX101Q9BY14 249 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 FRMD8Q9BZ67 464 aaPredicted RBP17.3■□□□□ 0.36
HMGN1-210ENST00000464078 CDH19Q9H159 772 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 VPS16Q9H269 839 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 CARS2Q9HA77 564 aaKnown RBP17.3■□□□□ 0.36
HMGN1-210ENST00000464078 PHPT1Q9NRX4 125 aaPredicted RBP17.3■□□□□ 0.36
HMGN1-210ENST00000464078 TAAR2Q9P1P5 351 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 AP4E1Q9UPM8 1137 aa17.3■□□□□ 0.36
HMGN1-210ENST00000464078 RHPN2P1A8MT19 583 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 AGRPO00253 132 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 CEACAM5P06731 702 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 FGF3P11487 239 aaPredicted RBP17.29■□□□□ 0.36
HMGN1-210ENST00000464078 DESP17661 470 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 TEAD1P28347 426 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 CD1CP29017 333 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 ALDH4A1P30038 563 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 LIMK2P53671 638 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 IL10RBQ08334 325 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 PEX6Q13608 980 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 ACOX1Q15067 660 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 KRT31Q15323 416 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 FKBP15Q5T1M5 1219 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 HEATR4Q86WZ0 1026 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 OR4D9Q8NGE8 314 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 ZNF564Q8TBZ8 553 aaPredicted RBP17.29■□□□□ 0.36
HMGN1-210ENST00000464078 SP110Q9HB58 689 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 B4GALT6Q9UBX8 382 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 MOSPD1Q9UJG1 213 aa17.29■□□□□ 0.36
HMGN1-210ENST00000464078 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.28■□□□□ 0.36
HMGN1-210ENST00000464078 A0A1W2PQ67 120 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 EEF2KO00418 725 aaKnown RBP17.28■□□□□ 0.36
HMGN1-210ENST00000464078 TEX33O43247 280 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 HTRA2O43464 458 aaPredicted RBP17.28■□□□□ 0.36
HMGN1-210ENST00000464078 SOCS5O75159 536 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 FUCA1P04066 466 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 THRAP10827 490 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 OGDHQ02218 1023 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 SYCP1Q15431 976 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 CNGA3Q16281 694 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 DCUN1D2Q6PH85 259 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 RFX8Q6ZV50 586 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 NPWQ8N729 165 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 AGBL5Q8NDL9 886 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 RCBTB1Q8NDN9 531 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 ENOX1Q8TC92 643 aaKnown RBP17.28■□□□□ 0.36
HMGN1-210ENST00000464078 PMEPA1Q969W9 287 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 DTD2Q96FN9 168 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 NSMCE3Q96MG7 304 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 DPYSL5Q9BPU6 564 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 ASPSCR1Q9BZE9 553 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 GPATCH2LQ9NWQ4 482 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 SLC17A4Q9Y2C5 497 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 ST14Q9Y5Y6 855 aa17.28■□□□□ 0.36
HMGN1-210ENST00000464078 RELNP78509 3460 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 B4E171 279 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 PSMD11O00231 422 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 HEXIM1O94992 359 aaKnown RBP17.27■□□□□ 0.36
HMGN1-210ENST00000464078 ECEL1O95672 775 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 CSF2RBP32927 897 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 UGT1A3P35503 534 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 TSPAN7P41732 249 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 RENBPP51606 427 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 CDK3Q00526 305 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 KCNAB2Q13303 367 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 CA9Q16790 459 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 NAGSQ8N159 534 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 CBARPQ8N350 705 aaPredicted RBP17.27■□□□□ 0.36
HMGN1-210ENST00000464078 PAF1Q8N7H5 531 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 JPH3Q8WXH2 748 aaPredicted RBP17.27■□□□□ 0.36
HMGN1-210ENST00000464078 ZNF599Q96NL3 588 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 SEPT3Q9UH03 358 aa17.27■□□□□ 0.36
HMGN1-210ENST00000464078 ZFC3H1O60293 1989 aaKnown RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 IGHV1OR21-1A0A087WYE8 117 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 CAPN5O15484 640 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-210ENST00000464078 IVLP07476 585 aa17.26■□□□□ 0.35
HMGN1-210ENST00000464078 TPM2P07951 284 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms