RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ZFC3H1O60293 1989 aaKnown RBP14.49□□□□□ -0.09
SMC1A-204ENST00000463684 CHD5Q8TDI0 1954 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 IGHV1OR21-1A0A087WYE8 117 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 PRR19A6NJB7 356 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 A8MX80 341 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 PPM1DO15297 605 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 DUX1O43812 170 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 THRAP10827 490 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 AK4P27144 223 aaPredicted RBP14.48□□□□□ -0.09
SMC1A-204ENST00000463684 GNPDA1P46926 289 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 CSNK1DP48730 415 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 HDAC4P56524 1084 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 RALGDSQ12967 914 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 MAN2A1Q16706 1144 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 TPD52L1Q16890 204 aaPredicted RBP14.48□□□□□ -0.09
SMC1A-204ENST00000463684 AFMIDQ63HM1 303 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 SCYL2Q6P3W7 929 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 DPPA4Q7L190 304 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 TEX19Q8NA77 164 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 JOSD2Q8TAC2 188 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 AHCYL2Q96HN2 611 aaKnown RBP14.48□□□□□ -0.09
SMC1A-204ENST00000463684 DONSONQ9NYP3 566 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 FHOD1Q9Y613 1164 aa14.48□□□□□ -0.09
SMC1A-204ENST00000463684 LRP4O75096 1905 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 LOC101059948A0A1B0GTJ6 334 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 WASH4PA8MWX3 477 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 J3KR12 359 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 MTSS1O43312 755 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 PALMO75781 387 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 CEACAM5P06731 702 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 KRT3P12035 628 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 TCN2P20062 427 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 MMP8P22894 467 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 ERCC5P28715 1186 aaPredicted RBP14.47□□□□□ -0.09
SMC1A-204ENST00000463684 CD97P48960 835 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 GPLD1P80108 840 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 CTBSQ01459 385 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 ABHD18Q0P651 414 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 KLHDC7AQ5VTJ3 777 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 C16orf46Q6P387 395 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 CEACAM20Q6UY09 585 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 ZNF677Q86XU0 584 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 UNC5BQ8IZJ1 945 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 NAGSQ8N159 534 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 PATE1Q8WXA2 126 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 NUS1Q96E22 293 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 ZPBPQ9BS86 351 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 TRIT1Q9H3H1 467 aaKnown RBP14.47□□□□□ -0.09
SMC1A-204ENST00000463684 NDST4Q9H3R1 872 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 KCTD5Q9NXV2 234 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 TMEM9Q9P0T7 183 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 SUFUQ9UMX1 484 aa14.47□□□□□ -0.09
SMC1A-204ENST00000463684 LRRK2Q5S007 2527 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 SDK2Q58EX2 2172 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 FGF10O15520 208 aaPredicted RBP14.46□□□□□ -0.09
SMC1A-204ENST00000463684 PRAMEF11O60813 436 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 FUCA1P04066 466 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 PRKCSHP14314 528 aaPredicted RBP14.46□□□□□ -0.09
SMC1A-204ENST00000463684 OAS2P29728 719 aaKnown RBP14.46□□□□□ -0.09
SMC1A-204ENST00000463684 CSF2RBP32927 897 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 COPB1P53618 953 aaKnown RBP14.46□□□□□ -0.09
SMC1A-204ENST00000463684 MC2RQ01718 297 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 VWA3BQ502W6 1294 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 HEATR4Q86WZ0 1026 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 FAM114A1Q8IWE2 563 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 PELI3Q8N2H9 469 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 TSEN2Q8NCE0 465 aaKnown RBP14.46□□□□□ -0.09
SMC1A-204ENST00000463684 OR10G6Q8NH81 332 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 SLC30A5Q8TAD4 765 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 EPS8L1Q8TE68 723 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 ECHDC3Q96DC8 303 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 RTP4Q96DX8 246 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 CTRCQ99895 268 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 C11orf70Q9BRQ4 267 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 SELENOOQ9BVL4 669 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 TEX101Q9BY14 249 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 SPRY4Q9C004 299 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 PDFQ9HBH1 243 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 PLEKHB1Q9UF11 243 aaPredicted RBP14.46□□□□□ -0.09
SMC1A-204ENST00000463684 KCTD3Q9Y597 815 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 PCDHB3Q9Y5E6 796 aa14.46□□□□□ -0.09
SMC1A-204ENST00000463684 ARHGAP42A6NI28 874 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 A8MU76 341 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 MKRN2OSH3BPM6 223 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 PES1O00541 588 aaKnown RBP14.45□□□□□ -0.1
SMC1A-204ENST00000463684 VPS4BO75351 444 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 AGFG2O95081 481 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 KRT7P08729 469 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 UCHL3P15374 230 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 GM2AP17900 193 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 GPD1P21695 349 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 RFC1P35251 1148 aaPredicted RBP14.45□□□□□ -0.1
SMC1A-204ENST00000463684 ADCY8P40145 1251 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 ACTR1BP42025 376 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 RGRP47804 291 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 NDST2P52849 883 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 MLLT10P55197 1068 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 ACTR1AP61163 376 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 NSUN2Q08J23 767 aaKnown RBP eCLIP14.45□□□□□ -0.1
SMC1A-204ENST00000463684 CRTC2Q53ET0 693 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms