RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 MIPP30301 263 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 GNPDA1P46926 289 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 IL10RBQ08334 325 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 NSUN2Q08J23 767 aaKnown RBP eCLIP15.33■□□□□ 0.04
CMSS1-202ENST00000463526 SLC10A7Q0GE19 358 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 LBRQ14739 615 aaKnown RBP15.33■□□□□ 0.04
CMSS1-202ENST00000463526 PIM3Q86V86 326 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 HEATR4Q86WZ0 1026 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 NRROSQ86YC3 692 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 ZSCAN1Q8NBB4 408 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 RCBTB1Q8NDN9 531 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 KIAA1524Q8TCG1 905 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 TMEM159Q96B96 161 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 COQ10AQ96MF6 247 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 ERGIC2Q96RQ1 377 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 NUDT22Q9BRQ3 303 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 TRIM7Q9C029 511 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 PHPT1Q9NRX4 125 aaPredicted RBP15.33■□□□□ 0.04
CMSS1-202ENST00000463526 PARVAQ9NVD7 372 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 AKAP7Q9P0M2 348 aaPredicted RBP15.33■□□□□ 0.04
CMSS1-202ENST00000463526 TAAR2Q9P1P5 351 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 SEPT3Q9UH03 358 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 PCDHGA4Q9Y5G9 962 aa15.33■□□□□ 0.04
CMSS1-202ENST00000463526 RNF8O76064 485 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 ECEL1O95672 775 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 CPNE6O95741 557 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 FUCA1P04066 466 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 FGF1P05230 155 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 CCDC172P0C7W6 258 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 MYCLP1P12525 358 aaPredicted RBP15.32■□□□□ 0.04
CMSS1-202ENST00000463526 ETV3P41162 512 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 POLD2P49005 469 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 RENBPP51606 427 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 AP1S1P61966 158 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 ILF3Q12906 894 aaKnown RBP eCLIP15.32■□□□□ 0.04
CMSS1-202ENST00000463526 ZNF235Q14590 738 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 RFTN1Q14699 578 aaPredicted RBP15.32■□□□□ 0.04
CMSS1-202ENST00000463526 PTPRRQ15256 657 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 CNGA3Q16281 694 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 TBR1Q16650 682 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 TSR1Q2NL82 804 aaKnown RBP15.32■□□□□ 0.04
CMSS1-202ENST00000463526 DOK6Q6PKX4 331 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 SLC30A9Q6PML9 568 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 SASS6Q6UVJ0 657 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 IRF2BP2Q7Z5L9 587 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 GPBAR1Q8TDU6 330 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 PTCD2Q8WV60 388 aaKnown RBP15.32■□□□□ 0.04
CMSS1-202ENST00000463526 PATE1Q8WXA2 126 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 GSDMCQ9BYG8 508 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 LMBRD1Q9NUN5 540 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 CWC15Q9P013 229 aaKnown RBP15.32■□□□□ 0.04
CMSS1-202ENST00000463526 ANKRD36A6QL64 1941 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 LRP4O75096 1905 aa15.32■□□□□ 0.04
CMSS1-202ENST00000463526 MYO18BQ8IUG5 2567 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.31■□□□□ 0.04
CMSS1-202ENST00000463526 EIF3CLB5ME19 914 aaKnown RBP15.31■□□□□ 0.04
CMSS1-202ENST00000463526 ARHGAP6O43182 974 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 CPP00450 1065 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 ITGB2P05107 769 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 CEACAM5P06731 702 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 MPSTP25325 297 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 VIPR1P32241 457 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 PPM1FP49593 454 aaPredicted RBP15.31■□□□□ 0.04
CMSS1-202ENST00000463526 MYL5Q02045 173 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 TMCO4Q5TGY1 634 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 TMEM164Q5U3C3 297 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 NKAIN2Q5VXU1 208 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 PLEKHA7Q6IQ23 1121 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 ZNF574Q6ZN55 896 aaPredicted RBP15.31■□□□□ 0.04
CMSS1-202ENST00000463526 HSD11B1LQ7Z5J1 315 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 PSKH2Q96QS6 385 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 EIF3CQ99613 913 aaKnown RBP15.31■□□□□ 0.04
CMSS1-202ENST00000463526 SUFUQ9UMX1 484 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 PLEKHM1Q9Y4G2 1056 aa15.31■□□□□ 0.04
CMSS1-202ENST00000463526 TRBV23OR9-2A0A075B6M9 112 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 A0A0U1RQS6 177 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 A0A1W2PQC6 194 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 TMEM191CA6NGB0 347 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 HEXIM1O94992 359 aaKnown RBP15.3■□□□□ 0.04
CMSS1-202ENST00000463526 CTPS1P17812 591 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 AMPD1P23109 780 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 MAXP61244 160 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 CDK3Q00526 305 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 CTBSQ01459 385 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 RAET1GQ6H3X3 334 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 Q6ZVL8 140 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 CYP4V2Q6ZWL3 525 aaPredicted RBP15.3■□□□□ 0.04
CMSS1-202ENST00000463526 DTX1Q86Y01 620 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 PGBD5Q8N414 524 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 HTR3CQ8WXA8 447 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 PMEPA1Q969W9 287 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 CCDC74BQ96LY2 380 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 TEX101Q9BY14 249 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 NOD2Q9HC29 1040 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 STARD5Q9NSY2 213 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 ETNK2Q9NVF9 386 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 ANO10Q9NW15 660 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 MYO1AQ9UBC5 1043 aa15.3■□□□□ 0.04
CMSS1-202ENST00000463526 CNOT8Q9UFF9 292 aaKnown RBP15.3■□□□□ 0.04
CMSS1-202ENST00000463526 IL17BQ9UHF5 180 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms