RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 PKN3Q6P5Z2 889 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 CES3Q6UWW8 571 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 ZCCHC23Q6ZST2 131 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 NET1Q7Z628 596 aaPredicted RBP9.96□□□□□ -0.82
PTPRD-207ENST00000463477 SYNPOQ8N3V7 929 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 RTL3Q8N8U3 475 aaKnown RBP9.96□□□□□ -0.82
PTPRD-207ENST00000463477 WBP2Q969T9 261 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 MFSD3Q96ES6 412 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 VPS39Q96JC1 886 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 ZNF395Q9H8N7 513 aaPredicted RBP9.96□□□□□ -0.82
PTPRD-207ENST00000463477 LMAN1LQ9HAT1 526 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 ARNT2Q9HBZ2 717 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 C20orf96Q9NUD7 363 aaPredicted RBP9.96□□□□□ -0.82
PTPRD-207ENST00000463477 MARCH2Q9P0N8 246 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 STOML1Q9UBI4 398 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 NKX1-2Q9UD57 310 aaPredicted RBP9.96□□□□□ -0.82
PTPRD-207ENST00000463477 RAPGEFL1Q9UHV5 662 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 PLA2G4CQ9UP65 541 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 SNX10Q9Y5X0 201 aa9.96□□□□□ -0.82
PTPRD-207ENST00000463477 CACNA1IQ9P0X4 2223 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 VGLL3A8MV65 326 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 B2RBV5 119 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 G3V2L1 256 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 ATP9BO43861 1147 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 TRIM13O60858 407 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 STC2O76061 302 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 TM7SF2O76062 418 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 C2P06681 752 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 NDST2P52849 883 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 EFEMP1Q12805 493 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 TCF15Q12870 199 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 OLIG2Q13516 323 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 CCINQ13939 588 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 PON2Q15165 354 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 HSP90AA5PQ58FG0 334 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 PPM1JQ5JR12 505 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 METTL21CQ5VZV1 264 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 DENND5AQ6IQ26 1287 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 Q6ZNB5 142 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 ZC3HC1Q86WB0 502 aaKnown RBP9.95□□□□□ -0.82
PTPRD-207ENST00000463477 MIB1Q86YT6 1006 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 C1orf210Q8IVY1 113 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 BBS7Q8IWZ6 715 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 UMODL1-AS1Q8N2C9 162 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 PRSS33Q8NF86 280 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 SLC39A13Q96H72 371 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 FCRL2Q96LA5 508 aaPredicted RBP9.95□□□□□ -0.82
PTPRD-207ENST00000463477 RILPQ96NA2 401 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 AGAP2Q99490 1192 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 IER2Q9BTL4 223 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 CHRAC1Q9NRG0 131 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 LSM7Q9UK45 103 aaKnown RBP9.95□□□□□ -0.82
PTPRD-207ENST00000463477 TLR6Q9Y2C9 796 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 ZNF510Q9Y2H8 683 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 KIF26AQ9ULI4 1882 aaPredicted RBP9.95□□□□□ -0.82
PTPRD-207ENST00000463477 TICRRQ7Z2Z1 1910 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 COL4A2P08572 1712 aa9.95□□□□□ -0.82
PTPRD-207ENST00000463477 LIN7AO14910 233 aaPredicted RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 ENTPD5O75356 428 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 CYP17A1P05093 508 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 ENO1P06733 434 aaKnown RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 KITP10721 976 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 IRF1P10914 325 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 DRD1P21728 446 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 NMBRP28336 390 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 PGM1P36871 562 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 EIF2DP41214 584 aaKnown RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 NUMBP49757 651 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 PTPN5P54829 565 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 GRSF1Q12849 480 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 MTA1Q13330 715 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 LRRC32Q14392 662 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 TRIP4Q15650 581 aaPredicted RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 GAB4Q2WGN9 574 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 TRMT5Q32P41 509 aaKnown RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 LY6G5CQ5SRR4 150 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 KIAA0930Q6ICG6 404 aaPredicted RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 RWDD4Q6NW29 188 aaKnown RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 RFWD3Q6PCD5 774 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 RANBP10Q6VN20 620 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 ZYG11AQ6WRX3 759 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 KIAA0408Q6ZU52 694 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 CMC1Q7Z7K0 106 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 GALNT7Q86SF2 657 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 PLD6Q8N2A8 252 aaKnown RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 RBM15BQ8NDT2 890 aaKnown RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 PPHLN1Q8NEY8 458 aaKnown RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 CELF6Q96J87 481 aaKnown RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 RANBP9Q96S59 729 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 P2RY13Q9BPV8 354 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 EBF4Q9BQW3 602 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 SLC39A8Q9C0K1 460 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 CHRDQ9H2X0 955 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 NMRAL1Q9HBL8 299 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 FBRSL1Q9HCM7 1045 aaKnown RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 SPHK2Q9NRA0 654 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 IARS2Q9NSE4 1012 aaKnown RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 OXSMQ9NWU1 459 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 ARMCX1Q9P291 453 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 STX18Q9P2W9 335 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms