RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 C17orf77Q96MU5 243 aa2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 ZNF570Q96NI8 536 aa2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 FSD1Q9BTV5 496 aa2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 LMAN2LQ9H0V9 348 aa2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 WDR13Q9H1Z4 485 aa2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 SLC32A1Q9H598 525 aa2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 CNGB3Q9NQW8 809 aa2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 SMYD2Q9NRG4 433 aa2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 INTS10Q9NVR2 710 aaKnown RBP2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 CISD1Q9NZ45 108 aaKnown RBP2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 ZNF711Q9Y462 761 aa2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 RIPOR2Q9Y4F9 1068 aa2.38□□□□□ -2.03
NDUFA4-202ENST00000463308 FAM90A7PA6NKC0 464 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 SH2D7A6NKC9 451 aaPredicted RBP2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 FAM90A22PA8MWA6 464 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 FAM90A12PA8MX19 464 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 FAM90A23PA8MXZ1 464 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 ZNF587BE7ETH6 402 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 ARHGEF9O43307 516 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 PLRG1O43660 514 aaKnown RBP2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 CEP104O60308 925 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 WDR1O75083 606 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 NDUFS7O75251 213 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 IGLV1-44P01699 117 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 SLC2A4P14672 509 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 PAX1P15863 534 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 CHRNB4P30926 498 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 MMP14P50281 582 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 PRKG1Q13976 671 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 BRD3Q15059 726 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 TAF5Q15542 800 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 EFNB3Q15768 340 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 KRT24Q2M2I5 525 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 ESCO2Q56NI9 601 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 PAPPA-AS1Q5QFB9 102 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 TTI2Q6NXR4 508 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 LCTLQ6UWM7 567 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 DSG4Q86SJ6 1040 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 HERC6Q8IVU3 1022 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 AGBL3Q8NEM8 1001 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 GJC3Q8NFK1 279 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 CEP70Q8NHQ1 597 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 STAMQ92783 540 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 SNAPC3Q92966 411 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 ERGIC1Q969X5 290 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 SIN3AQ96ST3 1273 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 MPHOSPH6Q99547 160 aaKnown RBP2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 FEM1BQ9UK73 627 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 CARD8Q9Y2G2 431 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 GDAQ9Y2T3 454 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 RRP7AQ9Y3A4 280 aaKnown RBP2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 NFE2L3Q9Y4A8 694 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 PSAT1Q9Y617 370 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 RNF215Q9Y6U7 377 aa2.37□□□□□ -2.03
NDUFA4-202ENST00000463308 C17orf113A0A1B0GUU1 675 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 NDUFAF8A1L188 74 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 MEIOCA2RUB1 952 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 PABPN1LA6NDY0 278 aaKnown RBP2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 CBY3A6NI87 242 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 PEX12O00623 359 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 PER2O15055 1255 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 KLK10O43240 276 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 ZNF500O60304 480 aaPredicted RBP2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 FGF5P12034 268 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 ITGAXP20702 1163 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 LUMP51884 338 aaPredicted RBP2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 NR1H2P55055 460 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 CLDN2P57739 230 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 IRX1P78414 480 aaPredicted RBP2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 CHRNDQ07001 517 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 NAA25Q14CX7 972 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 PDCD2Q16342 344 aaPredicted RBP2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 SIRPB2Q5JXA9 342 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 ANKRD45Q5TZF3 282 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 C17orf99Q6UX52 265 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 B3GNT6Q6ZMB0 384 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 ZNF497Q6ZNH5 498 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 SUGP1Q8IWZ8 645 aaKnown RBP2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 CIARTQ8N365 385 aaPredicted RBP2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 SPATA22Q8NHS9 363 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 BBS10Q8TAM1 723 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 RAB40AQ8WXH6 277 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 RND1Q92730 232 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 LRR1Q96L50 414 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 COG8Q96MW5 612 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 ZNF599Q96NL3 588 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 TWNKQ96RR1 684 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 CD180Q99467 661 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 LITAFQ99732 161 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 STN1Q9H668 368 aaKnown RBP2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 NOD2Q9HC29 1040 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 ALKBH4Q9NXW9 302 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 RCOR1Q9UKL0 485 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 PADI1Q9ULC6 663 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 A3GALT2U3KPV4 340 aa2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 PDS5AQ29RF7 1337 aaKnown RBP2.36□□□□□ -2.03
NDUFA4-202ENST00000463308 A0A0J9YWU9 116 aa2.35□□□□□ -2.03
NDUFA4-202ENST00000463308 A0A0U1RQF3 1178 aa2.35□□□□□ -2.03
NDUFA4-202ENST00000463308 hCG_1642624A0A1W2PR95 340 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms