RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 PIGNO95427 931 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 POP4O95707 220 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 ANXA6P08133 673 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 HGFP14210 728 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 TIMP2P16035 220 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 AMPD1P23109 780 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 CDC25BP30305 580 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 SLC5A2P31639 672 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 UGT1A5P35504 534 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 RGRP47804 291 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 RPIAP49247 311 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 PAPOLAP51003 745 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 HK3P52790 923 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 GEMIN4P57678 1058 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 SNRPD1P62314 119 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 CCL7P80098 99 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 PPARDQ03181 441 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 DPYSL3Q14195 570 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 PTK2BQ14289 1009 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 TCEAL1Q15170 157 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 CYTH1Q15438 398 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 TCEA2Q15560 299 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 TGIF1Q15583 401 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 TSR1Q2NL82 804 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 WSCD2Q2TBF2 565 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 LINC00303Q3SY05 128 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 TMEM52BQ4KMG9 183 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 BOLA3Q53S33 107 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 GDPD4Q6W3E5 623 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 CCDC81Q6ZN84 652 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 SFTPA2Q8IWL1 248 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 SDR16C5Q8N3Y7 309 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 RYBPQ8N488 228 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 ARL14Q8N4G2 192 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 SLC35G2Q8TBE7 412 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 GLMNQ92990 594 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 WNT2BQ93097 391 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 FUBP1Q96AE4 644 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 FAF2Q96CS3 445 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 CCDC97Q96F63 343 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 PDXPQ96GD0 296 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 NSMCE3Q96MG7 304 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 GDAP1L1Q96MZ0 367 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 PANX2Q96RD6 677 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 CCNL2Q96S94 520 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 WRAP53Q9BUR4 548 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 FOXP3Q9BZS1 431 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 SLC13A1Q9BZW2 595 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 CLMPQ9H6B4 373 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 SYNDIG1Q9H7V2 258 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 SIRPGQ9P1W8 387 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 DKK3Q9UBP4 350 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 INTUQ9ULD6 942 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 TFR2Q9UP52 801 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 REXO2Q9Y3B8 237 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 PCDHGA7Q9Y5G6 932 aa7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 ZNF106Q9H2Y7 1883 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-210ENST00000462553 RCCD1A6NED2 376 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 TMEM110-MUSTN1A8MSY1 372 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 TOR1BO14657 336 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 BUB1O43683 1085 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 MFSD11O43934 449 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 PEX11BO96011 259 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 WT1P19544 449 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 CCKBRP32239 447 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 GJC1P36383 396 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 MMP12P39900 470 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 PEX5P50542 639 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 HADHBP55084 474 aaKnown RBP7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 CDH6P55285 790 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 EIF3IQ13347 325 aaKnown RBP7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 MESDQ14696 234 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 NFATC4Q14934 902 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 INO80DQ53TQ3 878 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 FAXCQ5TGI0 409 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 NCBP2-AS2Q69YL0 99 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 RAD9BQ6WBX8 426 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 TMPRSS9Q7Z410 1059 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 TTC7BQ86TV6 843 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 ZSWIM9Q86XI8 627 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 HID1Q8IV36 788 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 RHOT2Q8IXI1 618 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 CCDC170Q8IYT3 715 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 FSTL5Q8N475 847 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 GPR156Q8NFN8 814 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 CXorf40AQ8TE69 158 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 CASKIN2Q8WXE0 1202 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 TSACCQ96A04 125 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 EXOC2Q96KP1 924 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 ZNF670Q9BS34 389 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 CPEB1Q9BZB8 566 aaKnown RBP7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 EPB41L5Q9HCM4 733 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 RCOR3Q9P2K3 495 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 UBA2Q9UBT2 640 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 HPCAL4Q9UM19 191 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 CENPEQ02224 2701 aa7.96□□□□□ -1.14
CDC42BPA-210ENST00000462553 RP1L1Q8IWN7 2480 aaPredicted RBP7.95□□□□□ -1.14
CDC42BPA-210ENST00000462553 ARHGAP42A6NI28 874 aa7.95□□□□□ -1.14
CDC42BPA-210ENST00000462553 C3orf70A6NLC5 250 aaPredicted RBP7.95□□□□□ -1.14
CDC42BPA-210ENST00000462553 DFFAO00273 331 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms