RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 JAMLQ86YT9 394 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 TP53I13Q8NBR0 393 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-221ENST00000462352 DENND6BQ8NEG7 585 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 CCHCR1Q8TD31 782 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 BLOC1S5Q8TDH9 187 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 EID2BQ96D98 161 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 SLC6A18Q96N87 628 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 LENG8Q96PV6 779 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-221ENST00000462352 SRPK1Q96SB4 655 aaKnown RBP11.8□□□□□ -0.52
CPNE1-221ENST00000462352 KLF6Q99612 283 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-221ENST00000462352 TRABDQ9H4I3 376 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 ZFYVE1Q9HBF4 777 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 TM9SF3Q9HD45 589 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 HACD3Q9P035 362 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 SUSD2Q9UGT4 822 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 CA5BQ9Y2D0 317 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 TRPM6Q9BX84 2022 aa11.8□□□□□ -0.52
CPNE1-221ENST00000462352 PLXNA2O75051 1894 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 A0A1B0GTW7 788 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 TCRBV7S3A2A0A539 114 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 AURKAO14965 403 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 BCAT2O15382 392 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-221ENST00000462352 SLC4A1P02730 911 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 GNSP15586 552 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 TPSB2P20231 275 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 HOXD12P35452 270 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 ETV3P41162 512 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 GRIA1P42261 906 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 RACK1P63244 317 aaKnown RBP11.79□□□□□ -0.52
CPNE1-221ENST00000462352 CDH17Q12864 832 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 MSLNQ13421 630 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-221ENST00000462352 KCNJ11Q14654 390 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 LRRC14Q15048 493 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 TPSAB1Q15661 275 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 CCDC6Q16204 474 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 WSCD2Q2TBF2 565 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 PLA2G2CQ5R387 149 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 PPP1R21Q6ZMI0 780 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 GCNT7Q6ZNI0 430 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 RFLNAQ6ZTI6 216 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 Q6ZVL8 140 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 SYDE1Q6ZW31 735 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-221ENST00000462352 GLT6D1Q7Z4J2 308 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 TMC3Q7Z5M5 1100 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 TECPR1Q7Z6L1 1165 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 TTC30BQ8N4P2 665 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 TMEM145Q8NBT3 493 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 OR52K1Q8NGK4 314 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 CPT1BQ92523 772 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 CENPTQ96BT3 561 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 DTD2Q96FN9 168 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 TRIM51Q9BSJ1 452 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 C1QTNF7Q9BXJ2 289 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 GPR63Q9BZJ6 419 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 MBNL1Q9NR56 388 aaKnown RBP11.79□□□□□ -0.52
CPNE1-221ENST00000462352 AASDHPPTQ9NRN7 309 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 PIH1D1Q9NWS0 290 aaKnown RBP11.79□□□□□ -0.52
CPNE1-221ENST00000462352 NCDNQ9UBB6 729 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 ASIC3Q9UHC3 531 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 DOCK9Q9BZ29 2069 aa11.79□□□□□ -0.52
CPNE1-221ENST00000462352 LRRK1Q38SD2 2015 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 A0A1W2PR77 199 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 PRR5-ARHGAP8B1AHC4 643 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 PATE3B3GLJ2 98 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 H0Y8X5 98 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 FPGTO14772 594 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 RAD51CO43502 376 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 TPH1P17752 444 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 CD38P28907 300 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 IGFALSP35858 605 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 HMGCLP35914 325 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 ADCY8P40145 1251 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 MAGEA6P43360 314 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 AFF3P51826 1226 aaKnown RBP11.78□□□□□ -0.52
CPNE1-221ENST00000462352 CLDN2P57739 230 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 MRPS25P82663 173 aaKnown RBP11.78□□□□□ -0.52
CPNE1-221ENST00000462352 CDK16Q00536 496 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 STAT4Q14765 748 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 IRF4Q15306 451 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 DUOXA1Q1HG43 343 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 ANKRD22Q5VYY1 191 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 LAYNQ6UX15 382 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 ASCL5Q7RTU5 278 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 MAATS1Q7Z4T9 603 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 RABEPKQ7Z6M1 372 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 RAVER1Q8IY67 606 aaKnown RBP11.78□□□□□ -0.52
CPNE1-221ENST00000462352 DNAAF3Q8N9W5 541 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 CEP76Q8TAP6 659 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 RUBCNQ92622 972 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 NUS1Q96E22 293 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 BMFQ96LC9 184 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 SMOC1Q9H4F8 434 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 CASS4Q9NQ75 786 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 KCTD5Q9NXV2 234 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 PKD2L2Q9NZM6 624 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 CD84Q9UIB8 345 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 HS3ST3A1Q9Y663 406 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 ZFHX2Q9C0A1 2572 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-221ENST00000462352 OTOGLQ3ZCN5 2332 aa11.78□□□□□ -0.52
CPNE1-221ENST00000462352 POM121BA6NF01 834 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms