RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 RAPGEF5Q92565 580 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 MAML1Q92585 1016 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 ALG3Q92685 438 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 RNF34Q969K3 372 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 DACT3Q96B18 629 aaPredicted RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 MRGPRX1Q96LB2 322 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 RNF157Q96PX1 679 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 MKRN2Q9H000 416 aaKnown RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 SEMA4AQ9H3S1 761 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 DHX35Q9H5Z1 703 aaKnown RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 CATSPERBQ9H7T0 1116 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 CNTD2Q9H8S5 307 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 PRSS16Q9NQE7 514 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS36-202ENST00000462289 ETNK2Q9NVF9 386 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 POLR3BQ9NW08 1133 aaPredicted RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 GPATCH2LQ9NWQ4 482 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 ZSCAN32Q9NX65 697 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 ERVK13-1Q9NX77 482 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 SIRT5Q9NXA8 310 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 COX16Q9P0S2 106 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 PCSK1NQ9UHG2 260 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 SLCO3A1Q9UIG8 710 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 GGT7Q9UJ14 662 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 MFHAS1Q9Y4C4 1052 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 PCDHA3Q9Y5H8 950 aa5.84□□□□□ -1.47
VPS36-202ENST00000462289 ASCC3Q8N3C0 2202 aaKnown RBP5.84□□□□□ -1.47
VPS36-202ENST00000462289 PCNX2A6NKB5 2137 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 EDDM13A0A1B0GTR0 161 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 TSPAN11A1L157 253 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 RASA4BC9J798 803 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 H0Y626 953 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 EEF2KO00418 725 aaKnown RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 MCF2LO15068 1137 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 RASA4O43374 803 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 LAMTOR5O43504 91 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 SMAD6O43541 496 aaKnown RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 SNAP91O60641 907 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 MAFKO60675 156 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 TRIM13O60858 407 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 RAMP2O60895 175 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 SRGAP2O75044 1071 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 KLF8O95600 359 aaPredicted RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 APBB3O95704 486 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 RHOCP08134 193 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 HOXB2P14652 356 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 DESP17661 470 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 POLR2EP19388 210 aaKnown RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 PI3P19957 117 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 ACVRL1P37023 503 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 BUD31P41223 144 aaPredicted RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 MARCKSL1P49006 195 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 TPI1P60174 286 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 NHLH1Q02575 133 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 DMWDQ09019 674 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 SLC10A2Q12908 348 aaPredicted RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 KLF1Q13351 362 aaPredicted RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 MESDQ14696 234 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 RFTN1Q14699 578 aaPredicted RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 SMTNL2Q2TAL5 461 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 ANKRD20A8PQ5CZ79 823 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 DCAF12L1Q5VU92 463 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 RNF219Q5W0B1 726 aaPredicted RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 SCYL2Q6P3W7 929 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 GK5Q6ZS86 529 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 USP30Q70CQ3 517 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 TFAP2DQ7Z6R9 452 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 SLCO6A1Q86UG4 719 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 LONP2Q86WA8 852 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 REXO1L1PQ8IX06 675 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 RHOT1Q8IXI2 618 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 TXLNBQ8N3L3 684 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 CARNMT1Q8N4J0 409 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 PCDH20Q8N6Y1 951 aaKnown RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 OR7D4Q8NG98 312 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 OR2A12Q8NGT7 310 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 OR2T3Q8NH03 318 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 GAB3Q8WWW8 586 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 KRT35Q92764 455 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 TADA1Q96BN2 335 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 HDAC11Q96DB2 347 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 HMCESQ96FZ2 354 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 NSMCE3Q96MG7 304 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 SLC6A18Q96N87 628 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 ZNF599Q96NL3 588 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 PSKH2Q96QS6 385 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 HERPUD2Q9BSE4 406 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 DESI2Q9BSY9 194 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 PCED1AQ9H1Q7 454 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 GOLPH3Q9H4A6 298 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 ZWILCHQ9H900 591 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 ITM2CQ9NQX7 267 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 SPATA6Q9NWH7 488 aaPredicted RBP5.83□□□□□ -1.48
VPS36-202ENST00000462289 DTLQ9NZJ0 730 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 LHX3Q9UBR4 397 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 TRIM10Q9UDY6 481 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 AMACRQ9UHK6 382 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 SCML1Q9UN30 329 aa5.83□□□□□ -1.48
VPS36-202ENST00000462289 RAD54BQ9Y620 910 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms