RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 BBIP1A8MTZ0 92 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 HHLA1C9JL84 531 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 CCL22O00626 93 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 ARPC2O15144 300 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 CLOCKO15516 846 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 CAPN15O75808 1086 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 HMOX2P30519 316 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 CDKN2DP55273 166 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 GRB7Q14451 532 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 LCN8Q6JVE9 175 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 XKR5Q6UX68 686 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 RANBP10Q6VN20 620 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 PIM3Q86V86 326 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 C9orf16Q9BUW7 83 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 TRIM15Q9C019 465 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 POLR1BQ9H9Y6 1135 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 RBM22Q9NW64 420 aaKnown RBP eCLIP18.47■□□□□ 0.55
HPS3-204ENST00000462030 SH3GLB1Q9Y371 365 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 MIA3Q5JRA6 1907 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 MMP3P08254 477 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 MTHFD1P11586 935 aaKnown RBP18.47■□□□□ 0.55
HPS3-204ENST00000462030 SOX11P35716 441 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 LEPRP48357 1165 aaKnown RBP18.47■□□□□ 0.55
HPS3-204ENST00000462030 PSMD7P51665 324 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 CLCN5P51795 746 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 FOXA1P55317 472 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 SH3BP2P78314 561 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 ZNF33AQ06730 810 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 KIAA0408Q6ZU52 694 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 CHST15Q7LFX5 561 aaPredicted RBP18.47■□□□□ 0.55
HPS3-204ENST00000462030 TBC1D15Q8TC07 691 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 SEPT8Q92599 483 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 HDAC10Q969S8 669 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 CENPNQ96H22 339 aaPredicted RBP18.47■□□□□ 0.55
HPS3-204ENST00000462030 FEM1CQ96JP0 617 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 MYRFLQ96LU7 910 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 ZFP42Q96MM3 310 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 SLC38A7Q9NVC3 462 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 TBC1D13Q9NVG8 400 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 FADS3Q9Y5Q0 445 aa18.47■□□□□ 0.55
HPS3-204ENST00000462030 LRRC14BA6NHZ5 514 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 ANGPT2O15123 496 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 MATN3O15232 486 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 SUPT3HO75486 399 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 RASAL1O95294 804 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 HSD17B1P14061 328 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 SLC6A2P23975 617 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 DCKP27707 260 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 YAP1P46937 504 aaKnown RBP18.46■□□□□ 0.55
HPS3-204ENST00000462030 APLP1P51693 650 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 ZNF135P52742 658 aaPredicted RBP18.46■□□□□ 0.55
HPS3-204ENST00000462030 TNK2Q07912 1038 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 SPRED1Q7Z699 444 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 ISCA2Q86U28 154 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 ZBTB46Q86UZ6 589 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 PTERQ96BW5 349 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 L3HYPDHQ96EM0 354 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 DOK1Q99704 481 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 HOPXQ9BPY8 73 aaPredicted RBP18.46■□□□□ 0.55
HPS3-204ENST00000462030 VTA1Q9NP79 307 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 ACTR3BQ9P1U1 418 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 NDUFAF1Q9Y375 327 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 IPPQ9Y573 584 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 PTGESO14684 152 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 PIP5K1BO14986 540 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 SLC14A2Q15849 920 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 MINDY1Q8N5J2 469 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 TRMOQ9BU70 441 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 KATNBL1Q9H079 304 aa18.46■□□□□ 0.55
HPS3-204ENST00000462030 UNCXA6NJT0 531 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 SIX3O95343 332 aaPredicted RBP18.45■□□□□ 0.54
HPS3-204ENST00000462030 GFAPP14136 432 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 CD97P48960 835 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 CBX3Q13185 183 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 KCTD8Q6ZWB6 473 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 CLYBLQ8N0X4 340 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 SMG8Q8ND04 991 aaKnown RBP18.45■□□□□ 0.54
HPS3-204ENST00000462030 DQX1Q8TE96 717 aaKnown RBP18.45■□□□□ 0.54
HPS3-204ENST00000462030 SENP8Q96LD8 212 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 KCNA7Q96RP8 456 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 PRKD2Q9BZL6 878 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 TBC1D23Q9NUY8 699 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.45■□□□□ 0.54
HPS3-204ENST00000462030 VWA7Q9Y334 891 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 INPP4BO15327 924 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 MAPK10P53779 464 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 WNT3AP56704 352 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 BNIP2Q12982 314 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 NEDD8Q15843 81 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 CYP51A1Q16850 503 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 GEN1Q17RS7 908 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 ZNF792Q3KQV3 632 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 PRMT9Q6P2P2 845 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 ABRAXAS1Q6UWZ7 409 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 IFNEQ86WN2 208 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 PHYKPLQ8IUZ5 450 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 MIER2Q8N344 545 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 OR52K2Q8NGK3 314 aa18.45■□□□□ 0.54
HPS3-204ENST00000462030 ZNF420Q8TAQ5 688 aaPredicted RBP18.45■□□□□ 0.54
HPS3-204ENST00000462030 TWIST2Q8WVJ9 160 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms