RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TSPAN11A1L157 253 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 RECQL5O94762 991 aaPredicted RBP17.25■□□□□ 0.35
TOP3A-202ENST00000461127 ECEL1O95672 775 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 SERPINC1P01008 464 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 FGF1P05230 155 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 ATP1A3P13637 1013 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 MPSTP25325 297 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 GABRB2P47870 512 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 SQSTM1Q13501 440 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 RAPGEF1Q13905 1077 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 TCP11X2Q5H9J9 407 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 MANEALQ5VSG8 457 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 NKAIN2Q5VXU1 208 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 TCTN3Q6NUS6 607 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 CEACAM20Q6UY09 585 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 XYLT1Q86Y38 959 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 DNAAF5Q86Y56 855 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 UNC5BQ8IZJ1 945 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 GALNT11Q8NCW6 608 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 MSANTD4Q8NCY6 345 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 TBC1D31Q96DN5 1066 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 ZNF641Q96N77 438 aaPredicted RBP17.25■□□□□ 0.35
TOP3A-202ENST00000461127 ZPBPQ9BS86 351 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 HSD3B7Q9H2F3 369 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 CARS2Q9HA77 564 aaKnown RBP17.25■□□□□ 0.35
TOP3A-202ENST00000461127 TAAR2Q9P1P5 351 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 PCDHB3Q9Y5E6 796 aa17.25■□□□□ 0.35
TOP3A-202ENST00000461127 GOLGA8SH3BPF8 625 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 INSIG1O15503 277 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 ADRA1BP35368 520 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 TRIM23P36406 574 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 UQCRFS1P47985 274 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 BPIFB4P59827 614 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 ATP11AP98196 1134 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 CAPRIN2Q6IMN6 1127 aaKnown RBP17.24■□□□□ 0.35
TOP3A-202ENST00000461127 TMEM71Q6P5X7 295 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 GBP6Q6ZN66 633 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 ASB18Q6ZVZ8 466 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 BNIPLQ7Z465 357 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 SLC47A2Q86VL8 602 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 CCDC13Q8IYE1 715 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 NETO2Q8NC67 525 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 ANP32BQ92688 251 aaKnown RBP17.24■□□□□ 0.35
TOP3A-202ENST00000461127 RTP4Q96DX8 246 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 AHCYL2Q96HN2 611 aaKnown RBP17.24■□□□□ 0.35
TOP3A-202ENST00000461127 EXOC2Q96KP1 924 aa17.24■□□□□ 0.35
TOP3A-202ENST00000461127 SUDS3Q9H7L9 328 aaPredicted RBP17.24■□□□□ 0.35
TOP3A-202ENST00000461127 CUEDC1Q9NWM3 386 aaPredicted RBP17.24■□□□□ 0.35
TOP3A-202ENST00000461127 IGHV1OR21-1A0A087WYE8 117 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 TTLL8A6PVC2 850 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 TEX33O43247 280 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 LRIG2O94898 1065 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 ELFN1P0C7U0 828 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 SLC9A1P19634 815 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 NR1D1P20393 614 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 GNLYP22749 145 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 GPLD1P80108 840 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 FANCCQ00597 558 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 FILIP1LQ4L180 1135 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 ARCQ7LC44 396 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 PAF1Q8N7H5 531 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 LGR4Q9BXB1 951 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 TRNAU1APQ9NX07 287 aaKnown RBP17.23■□□□□ 0.35
TOP3A-202ENST00000461127 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 LIMA1Q9UHB6 759 aaKnown RBP17.23■□□□□ 0.35
TOP3A-202ENST00000461127 KCNMB2Q9Y691 235 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 ESPL1Q14674 2120 aa17.23■□□□□ 0.35
TOP3A-202ENST00000461127 ANKRD17O75179 2603 aaKnown RBP17.22■□□□□ 0.35
TOP3A-202ENST00000461127 PES1O00541 588 aaKnown RBP17.22■□□□□ 0.35
TOP3A-202ENST00000461127 CBFA2T2O43439 604 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 TPM3P06753 285 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 MYCLP1P12525 358 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-202ENST00000461127 PRKCSHP14314 528 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-202ENST00000461127 CSF2RBP32927 897 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 CDH5P33151 784 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-202ENST00000461127 CLCN1P35523 988 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 KRT31Q15323 416 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 CDO1Q16878 200 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 EXOC3L4Q17RC7 722 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 SLC30A9Q6PML9 568 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 SARM1Q6SZW1 724 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 NRROSQ86YC3 692 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 BMPERQ8N8U9 685 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 TUBGCP5Q96RT8 1024 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 SPRY4Q9C004 299 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 TRIM5Q9C035 493 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 PHPT1Q9NRX4 125 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-202ENST00000461127 LHX3Q9UBR4 397 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 TMEM59LQ9UK28 342 aa17.22■□□□□ 0.35
TOP3A-202ENST00000461127 FAM72CH0Y354 149 aa17.21■□□□□ 0.35
TOP3A-202ENST00000461127 PPM1DO15297 605 aa17.21■□□□□ 0.35
TOP3A-202ENST00000461127 STK17BO94768 372 aa17.21■□□□□ 0.35
TOP3A-202ENST00000461127 PLEKP08567 350 aaPredicted RBP17.21■□□□□ 0.35
TOP3A-202ENST00000461127 YBEYP58557 167 aaPredicted RBP17.21■□□□□ 0.35
TOP3A-202ENST00000461127 MC2RQ01718 297 aa17.21■□□□□ 0.35
TOP3A-202ENST00000461127 APBA1Q02410 837 aa17.21■□□□□ 0.35
TOP3A-202ENST00000461127 ATP1A1-AS1Q5TC04 95 aa17.21■□□□□ 0.35
TOP3A-202ENST00000461127 FAM72AQ5TYM5 149 aa17.21■□□□□ 0.35
TOP3A-202ENST00000461127 FAM72DQ6L9T8 149 aa17.21■□□□□ 0.35
TOP3A-202ENST00000461127 TRNP1Q6NT89 227 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms