RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 YPEL5P62699 121 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 NIPAL4Q0D2K0 466 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 TRAF2Q12933 501 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ZBTB17Q13105 803 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 PDE1CQ14123 709 aaPredicted RBP13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SLC14A2Q15849 920 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 LRRC73Q5JTD7 316 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 CCDC70Q6NSX1 233 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 USP45Q70EL2 814 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 KANSL1Q7Z3B3 1105 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 SLC25A45Q8N413 288 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ARRDC2Q8TBH0 407 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 MDM1Q8TC05 714 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 MAIP1Q8WWC4 291 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 BMFQ96LC9 184 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 NSMCE3Q96MG7 304 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 WRAP53Q9BUR4 548 aaKnown RBP13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ADGRE3Q9BY15 652 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 FRMD8P1Q9BZ68 369 aaPredicted RBP13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ABCG4Q9H172 646 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 CARD9Q9H257 536 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 GLOD4Q9HC38 313 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 KCTD5Q9NXV2 234 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 DNPEPQ9ULA0 475 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 RPL26L1Q9UNX3 145 aaKnown RBP13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 ITM2BQ9Y287 266 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 JRKLQ9Y4A0 524 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 PTPRBP23467 1997 aa13.28□□□□□ -0.28
RAB11FIP3-207ENST00000461009 POM121BA6NF01 834 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TRIM38O00635 465 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SCAMP1O15126 338 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 KIF5CO60282 957 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CSF2P04141 144 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ELFN1P0C7U0 828 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ITIH2P19823 946 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RBL1P28749 1068 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 VIPR1P32241 457 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MMP12P39900 470 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SKOR1P84550 965 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CYP4F3Q08477 520 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 WASHC5Q12768 1159 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ARHGEF7Q14155 803 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FGL2Q14314 439 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PROX2Q3B8N5 592 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ZNF569Q5MCW4 686 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 HES3Q5TGS1 186 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ITPRIPL1Q6GPH6 555 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 DPPA4Q7L190 304 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ZSWIM9Q86XI8 627 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SLC22A18ASQ8N1D0 253 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CACTIN-AS1Q8N1I8 211 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ATL2Q8NHH9 583 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GLMNQ92990 594 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SCRN2Q96FV2 425 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 IMP4Q96G21 291 aaKnown RBP13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 HERPUD2Q9BSE4 406 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CEP41Q9BYV8 373 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SLC13A1Q9BZW2 595 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PCDH9Q9HC56 1237 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TRMT1Q9NXH9 659 aaKnown RBP13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SPASTQ9UBP0 616 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GGT7Q9UJ14 662 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CLCA2Q9UQC9 943 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CHKBQ9Y259 395 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PPIL1Q9Y3C6 166 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 AK5Q9Y6K8 562 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CSNK1G3Q9Y6M4 447 aa13.27□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TAF4O00268 1085 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RAD51BO15315 384 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 KCNN4O15554 427 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SPINT1O43278 529 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FZD6O60353 706 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CAPNS1P04632 268 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PRKCGP05129 697 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CKMT1AP12532 417 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 NME1P15531 152 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 JUNDP17535 347 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 HTR1BP28222 390 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LIG3P49916 1009 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 BLKP51451 505 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TARDBPQ13148 414 aaKnown RBP eCLIP13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 KLF1Q13351 362 aaPredicted RBP13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FZD2Q14332 565 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LRRK1Q38SD2 2015 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ZNF542PQ5EBM4 170 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LIPIQ6XZB0 460 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SLC13A5Q86YT5 568 aaPredicted RBP13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ZNF567Q8N184 647 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FAM181AQ8N9Y4 354 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PIH1D2Q8WWB5 315 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CENPTQ96BT3 561 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PPP1R2P1Q96PQ5 205 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FCRL5Q96RD9 977 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SRPK1Q96SB4 655 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RBM15Q96T37 977 aaKnown RBP eCLIP13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 KLF6Q99612 283 aaPredicted RBP13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TLR10Q9BXR5 811 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TDRD1Q9BXT4 1180 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 UCKL1Q9NWZ5 548 aa13.26□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FAM153AQ9UHL3 310 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms