RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 UPF2Q9HAU5 1272 aaKnown RBP2.56□□□□□ -2
SYPL1-203ENST00000460770 TLR8Q9NR97 1041 aaKnown RBP2.56□□□□□ -2
SYPL1-203ENST00000460770 HCFC1R1Q9NWW0 138 aa2.56□□□□□ -2
SYPL1-203ENST00000460770 IL1RAPL1Q9NZN1 696 aa2.56□□□□□ -2
SYPL1-203ENST00000460770 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.56□□□□□ -2
SYPL1-203ENST00000460770 KCNK7Q9Y2U2 307 aa2.56□□□□□ -2
SYPL1-203ENST00000460770 A0A0G2JLW4 131 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 SH2D7A6NKC9 451 aaPredicted RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 IPO5O00410 1097 aaKnown RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 PEX12O00623 359 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 PER2O15055 1255 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 ZNF500O60304 480 aaPredicted RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 IRF1P10914 325 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 HLA-DOBP13765 273 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 ITGAXP20702 1163 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 S1PR1P21453 382 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 ZNF10P21506 573 aaPredicted RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 POU1F1P28069 291 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 GPD2P43304 727 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 HTR3AP46098 478 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 TBX4P57082 545 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 BRWD1-AS2P59051 145 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 KRTAP10-3P60369 221 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 PRKG1Q13976 671 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 HIST2H2ACQ16777 129 aaPredicted RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 PDS5AQ29RF7 1337 aaKnown RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 TCTN1Q2MV58 587 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 MMEL1Q495T6 779 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 GPATCH4Q5T3I0 446 aaKnown RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 ZC2HC1BQ5TFG8 222 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 SERTAD4-AS1Q5TG53 156 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 CPLX2Q6PUV4 134 aaKnown RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 MOB3CQ70IA8 216 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 CHERPQ8IWX8 916 aaKnown RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 CEP70Q8NHQ1 597 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 SLC20A1Q8WUM9 679 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 TRAPPC12Q8WVT3 735 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 TM9SF4Q92544 642 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 ABTB1Q969K4 478 aaPredicted RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 NEURL2Q9BR09 285 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 SYT17Q9BSW7 474 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 FAM167BQ9BTA0 163 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 SLC32A1Q9H598 525 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 BPIFA1Q9NP55 256 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 SLC7A10Q9NS82 523 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 BEX4Q9NWD9 120 aaPredicted RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 TTC7AQ9ULT0 858 aaPredicted RBP2.55□□□□□ -2
SYPL1-203ENST00000460770 LOXL2Q9Y4K0 774 aa2.55□□□□□ -2
SYPL1-203ENST00000460770 ARID4BQ4LE39 1312 aaPredicted RBP2.54□□□□□ -2
SYPL1-203ENST00000460770 hCG_1642624A0A1W2PR95 340 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 F5H423 210 aaPredicted RBP2.54□□□□□ -2
SYPL1-203ENST00000460770 PSMD14O00487 310 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 CHRNB4P30926 498 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 PAPOLAP51003 745 aaKnown RBP2.54□□□□□ -2
SYPL1-203ENST00000460770 HNRNPH2P55795 449 aaKnown RBP2.54□□□□□ -2
SYPL1-203ENST00000460770 GTF2H2Q13888 395 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 ZNF234Q14588 700 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 TAF11Q15544 211 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 PDCD2Q16342 344 aaPredicted RBP2.54□□□□□ -2
SYPL1-203ENST00000460770 TMEM35AQ53FP2 167 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 SIRPB2Q5JXA9 342 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 GGNBP1Q5YKI7 109 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 FAAP20Q6NZ36 180 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 GTF2H2CQ6P1K8 395 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 C17orf99Q6UX52 265 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 MTSS1LQ765P7 747 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 SH2D6Q7Z4S9 175 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.54□□□□□ -2
SYPL1-203ENST00000460770 GTSCR1Q86UQ5 136 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 C1orf87Q8N0U7 546 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 ZCCHC9Q8N567 271 aaKnown RBP2.54□□□□□ -2
SYPL1-203ENST00000460770 SRBD1Q8N5C6 995 aaKnown RBP2.54□□□□□ -2
SYPL1-203ENST00000460770 C11orf65Q8NCR3 313 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 KLHDC9Q8NEP7 349 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 TNIP2Q8NFZ5 429 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 ALG14Q96F25 216 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 STAMBPL1Q96FJ0 436 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 ST6GAL2Q96JF0 529 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 ZNF354BQ96LW1 612 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 BBS4Q96RK4 519 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 HAUS8Q9BT25 410 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 FSD1Q9BTV5 496 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 POLR3CQ9BUI4 534 aaPredicted RBP2.54□□□□□ -2
SYPL1-203ENST00000460770 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.54□□□□□ -2
SYPL1-203ENST00000460770 LMAN2LQ9H0V9 348 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 CSTL1Q9H114 145 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 PLCB1Q9NQ66 1216 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 DNAJC16Q9Y2G8 782 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 STON1Q9Y6Q2 735 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 RNF215Q9Y6U7 377 aa2.54□□□□□ -2
SYPL1-203ENST00000460770 IGLV5-45A0A087WSX0 123 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 PABPN1LA6NDY0 278 aaKnown RBP2.53□□□□□ -2
SYPL1-203ENST00000460770 TMEM202A6NGA9 273 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 SMIM1B2RUZ4 78 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 BCAT2O15382 392 aaPredicted RBP2.53□□□□□ -2
SYPL1-203ENST00000460770 IRAK2O43187 625 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 KLK8O60259 260 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 GUCY1B2O75343 617 aa2.53□□□□□ -2
SYPL1-203ENST00000460770 MT-CYBP00156 380 aaPredicted RBP2.53□□□□□ -2
SYPL1-203ENST00000460770 IGLV1-44P01699 117 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms