RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 CDKL3Q8IVW4 592 aaPredicted RBP12.88□□□□□ -0.35
SHISA5-211ENST00000460758 OR4C6Q8NH72 309 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 KIF18AQ8NI77 898 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 SLC35B2Q8TB61 432 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 NSMCE1Q8WV22 266 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 C1orf54Q8WWF1 131 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 FATE1Q969F0 183 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 IFT43Q96FT9 208 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 ATP13A3Q9H7F0 1226 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 C10orf88Q9H8K7 445 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 MBNL1Q9NR56 388 aaKnown RBP12.88□□□□□ -0.35
SHISA5-211ENST00000460758 DNAJC28Q9NX36 388 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 SEPT3Q9UH03 358 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 KLF15Q9UIH9 416 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 DNPEPQ9ULA0 475 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 PNMA8BQ9ULN7 279 aaPredicted RBP12.88□□□□□ -0.35
SHISA5-211ENST00000460758 ATP8A1Q9Y2Q0 1164 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 COQ6Q9Y2Z9 468 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 PCDHGA1Q9Y5H4 931 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 ZZEF1O43149 2961 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 FAM149AA5PLN7 773 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 TRAFD1O14545 582 aaPredicted RBP12.87□□□□□ -0.35
SHISA5-211ENST00000460758 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
SHISA5-211ENST00000460758 LIASO43766 372 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 CSF2P04141 144 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 CDK4P11802 303 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 C6P13671 934 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 CR2P20023 1033 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 RBL1P28749 1068 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 SCNN1BP51168 640 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 AP1S1P61966 158 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 IFI35P80217 286 aaPredicted RBP12.87□□□□□ -0.35
SHISA5-211ENST00000460758 NSUN2Q08J23 767 aaKnown RBP eCLIP12.87□□□□□ -0.35
SHISA5-211ENST00000460758 EIF2B5Q13144 721 aaKnown RBP12.87□□□□□ -0.35
SHISA5-211ENST00000460758 ZNF235Q14590 738 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 CCNG2Q16589 344 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 DARS2Q6PI48 645 aaKnown RBP12.87□□□□□ -0.35
SHISA5-211ENST00000460758 RBFAQ8N0V3 343 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 TEX26Q8N6G2 289 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 PRELID2Q8N945 189 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 ZNF548Q8NEK5 533 aaPredicted RBP12.87□□□□□ -0.35
SHISA5-211ENST00000460758 HTR3CQ8WXA8 447 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 AP1M1Q9BXS5 423 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 SEPT10Q9P0V9 454 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 RNF14Q9UBS8 474 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 DMXL2Q8TDJ6 3036 aa12.87□□□□□ -0.35
SHISA5-211ENST00000460758 LY6G6EA0A0G2JKS1 128 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 KCNK1O00180 336 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 PDE2AO00408 941 aaPredicted RBP12.86□□□□□ -0.35
SHISA5-211ENST00000460758 MTSS1O43312 755 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 NEBLO76041 1014 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 URI1O94763 535 aaPredicted RBP12.86□□□□□ -0.35
SHISA5-211ENST00000460758 JCHAINP01591 159 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 CCNB1P14635 433 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 CKMT2P17540 419 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 PAFAH1B1P43034 410 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 MMP13P45452 471 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 LIG3P49916 1009 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 RENBPP51606 427 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 BCL2L1Q07817 233 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 ZBTB17Q13105 803 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 CAMK2BQ13554 666 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 SNX1Q13596 522 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 OASLQ15646 514 aaKnown RBP12.86□□□□□ -0.35
SHISA5-211ENST00000460758 WSCD2Q2TBF2 565 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 MARC1Q5VT66 337 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 ERAP2Q6P179 960 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 DRICH1Q6PGQ1 229 aaPredicted RBP12.86□□□□□ -0.35
SHISA5-211ENST00000460758 BBS5Q8N3I7 341 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 GALNT15Q8N3T1 639 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 NUDCD1Q96RS6 583 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 IL12RB2Q99665 862 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 MGME1Q9BQP7 344 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 C1QTNF7Q9BXJ2 289 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 TCEAL2Q9H3H9 227 aaPredicted RBP12.86□□□□□ -0.35
SHISA5-211ENST00000460758 HOMER3Q9NSC5 361 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 RBM22Q9NW64 420 aaKnown RBP eCLIP12.86□□□□□ -0.35
SHISA5-211ENST00000460758 NLGN3Q9NZ94 848 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 U3KQA8 63 aa12.86□□□□□ -0.35
SHISA5-211ENST00000460758 GOLGA6L10A0A0M3HER8 536 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 CFAP69A5D8W1 941 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 KCNN4O15554 427 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 ZNF189O75820 626 aaPredicted RBP12.85□□□□□ -0.35
SHISA5-211ENST00000460758 HLA-DQB2P05538 268 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 C1SP09871 688 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 MYF5P13349 255 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 JUNDP17535 347 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 GM2AP17900 193 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 ACP1P24666 158 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 PTPN3P26045 913 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 HSPA9P38646 679 aaKnown RBP12.85□□□□□ -0.35
SHISA5-211ENST00000460758 THOP1P52888 689 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 MAXP61244 160 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 HNRNPKP61978 463 aaKnown RBP eCLIP12.85□□□□□ -0.35
SHISA5-211ENST00000460758 WASHC5Q12768 1159 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 TRAF2Q12933 501 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 LRRC14Q15048 493 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 AGERQ15109 404 aa12.85□□□□□ -0.35
SHISA5-211ENST00000460758 CYP1B1Q16678 543 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms