RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 TPP1O14773 563 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 PCNAP12004 261 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 MATKP42679 507 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 VEGFBP49765 207 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ACLYP53396 1101 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 COPZ1P61923 177 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 SLC24A5Q71RS6 500 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ASRGL1Q7L266 308 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 KRT74Q7RTS7 529 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ANKS1BQ7Z6G8 1248 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 HERC6Q8IVU3 1022 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 MARVELD2Q8N4S9 558 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ATG16L2Q8NAA4 619 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 PXYLP1Q8TE99 480 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 TMCO6Q96DC7 493 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 NSMCE3Q96MG7 304 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 SEPHS2Q99611 448 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 OSBPL10Q9BXB5 764 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 SDCBP2Q9H190 292 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 EPB41L1Q9H4G0 881 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF696Q9H7X3 374 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 CDHR5Q9HBB8 845 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 SMPD3Q9NY59 655 aaPredicted RBP6.21□□□□□ -1.42
VPS13D-202ENST00000460333 RCOR3Q9P2K3 495 aaPredicted RBP6.21□□□□□ -1.42
VPS13D-202ENST00000460333 SLC7A8Q9UHI5 535 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 PHF11Q9UIL8 331 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 SPATA2Q9UM82 520 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 PEX16Q9Y5Y5 336 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 A0A1W2PRG6 482 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 E2F8A0AVK6 867 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ANKRD33BA6NCL7 494 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 FBP2O00757 339 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 SLC22A1O15245 554 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 IFNA14P01570 189 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 INHAP05111 366 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 CFHP08603 1231 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 CYP2F1P24903 491 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 CYP2C18P33260 490 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 CDKN2BP42772 138 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ECT2LQ008S8 904 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 C5orf22Q49AR2 442 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 NOMO2Q5JPE7 1267 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 FAXCQ5TGI0 409 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF280DQ6N043 979 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 LLGL2Q6P1M3 1020 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 XKRXQ6PP77 449 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ISLR2Q6UXK2 745 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 DEFB106AQ8N104 65 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 MYO1HQ8N1T3 1032 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 WNT8BQ93098 351 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 CLPTM1LQ96KA5 538 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 RNF157Q96PX1 679 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 RHOBTB2Q9BYZ6 727 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 PRRG3Q9BZD7 231 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 WDCPQ9H6R7 721 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 CATSPERBQ9H7T0 1116 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 CASS4Q9NQ75 786 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 NUDT5Q9UKK9 219 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 GABRQQ9UN88 632 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 A0A0G2JMZ2 1700 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 LINC00854A0A1B0GVQ3 168 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ILVBLA1L0T0 632 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ARL5CA6NH57 179 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 MDM4O15151 490 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ZSCAN9O15535 394 aaPredicted RBP6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ITM2AO43736 263 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 FGBP02675 491 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 ALDH2P05091 517 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 GPIP06744 558 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 PRKAR1AP10644 381 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 COL6A1P12109 1028 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 RRM2P31350 389 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 CSE1LP55060 971 aaKnown RBP6.21□□□□□ -1.42
VPS13D-202ENST00000460333 MRPS5P82675 430 aaKnown RBP6.21□□□□□ -1.42
VPS13D-202ENST00000460333 MTM1Q13496 603 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 AAK1Q2M2I8 961 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 TRIM71Q2Q1W2 868 aaKnown RBP6.21□□□□□ -1.42
VPS13D-202ENST00000460333 INO80DQ53TQ3 878 aaPredicted RBP6.21□□□□□ -1.42
VPS13D-202ENST00000460333 LRRC49Q8IUZ0 686 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 DSELQ8IZU8 1212 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 PCDH20Q8N6Y1 951 aaKnown RBP6.21□□□□□ -1.42
VPS13D-202ENST00000460333 BANPQ8N9N5 519 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 WDR36Q8NI36 951 aaKnown RBP6.21□□□□□ -1.42
VPS13D-202ENST00000460333 TWNKQ96RR1 684 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 FBXO44Q9H4M3 255 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 DDIT4Q9NX09 232 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 TMEM161AQ9NX61 479 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 LSM7Q9UK45 103 aaKnown RBP6.21□□□□□ -1.42
VPS13D-202ENST00000460333 PCDHGA10Q9Y5H3 936 aa6.21□□□□□ -1.42
VPS13D-202ENST00000460333 RLFQ13129 1914 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 A0A0U1RQF3 1178 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 A0A1W2PQ72 361 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 H0YJX3 145 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 H7C0S8 307 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF623O75123 536 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SLC4A1P02730 911 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 LTFP02788 710 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 NTRK1P04629 796 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 CYBBP04839 570 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 TYMPP19971 482 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms