RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 MFSD3Q96ES6 412 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 APOPT1Q96IL0 206 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 EXOC2Q96KP1 924 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 MYADMQ96S97 322 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 C19orf43Q9BQ61 176 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 NSRP1Q9H0G5 558 aaKnown RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 PLAC1Q9HBJ0 212 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 ARHGEF3Q9NR81 526 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 TREX1Q9NSU2 369 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 MKS1Q9NXB0 559 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 FBXO4Q9UKT5 387 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 SLC27A6Q9Y2P4 619 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 FCF1Q9Y324 198 aaKnown RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 SIT1Q9Y3P8 196 aa8.98□□□□□ -0.97
VPS50-207ENST00000458530 ANKRD11Q6UB99 2663 aaPredicted RBP8.98□□□□□ -0.97
VPS50-207ENST00000458530 MROH6A6NGR9 719 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 CXorf49A8MYA2 514 aaPredicted RBP8.97□□□□□ -0.97
VPS50-207ENST00000458530 PRR5-ARHGAP8B1AHC4 643 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 COPEO14579 308 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 LCE2BO14633 110 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 SIN3BO75182 1162 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 RPP40O75818 363 aaKnown RBP8.97□□□□□ -0.97
VPS50-207ENST00000458530 VAPBO95292 243 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 CD160O95971 181 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 C1QAP02745 245 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 ITGA2BP08514 1039 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 ERVK-10P10266 1014 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 SRCP12931 536 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 CD46P15529 392 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 CHN1P15882 459 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 KRT4P19013 534 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 SLC19A1P41440 591 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 RGRP47804 291 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 SERPINB8P50452 374 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 LIMK2P53671 638 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 ST8SIA6P61647 398 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 ARHGAP8P85298 464 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 HTR4Q13639 388 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 GALNT3Q14435 633 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 HSP90AA5PQ58FG0 334 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 HHATQ5VTY9 493 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 MBLAC2Q68D91 279 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 GRAMD4Q6IC98 578 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 MRNIPQ6NTE8 343 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 AFTPHQ6ULP2 937 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 LIAT1Q6ZQX7 453 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 GLT6D1Q7Z4J2 308 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 CCDC91Q7Z6B0 441 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 STRA8Q7Z7C7 330 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 KIAA0907Q7Z7F0 614 aaPredicted RBP8.97□□□□□ -0.97
VPS50-207ENST00000458530 LCA5Q86VQ0 697 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 CYP4X1Q8N118 509 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 RYBPQ8N488 228 aaPredicted RBP8.97□□□□□ -0.97
VPS50-207ENST00000458530 OTUD6BQ8N6M0 293 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 MZB1Q8WU39 189 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 PDCD6IPQ8WUM4 868 aaKnown RBP8.97□□□□□ -0.97
VPS50-207ENST00000458530 UCMAQ8WVF2 138 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 PTPRN2Q92932 1015 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.97□□□□□ -0.97
VPS50-207ENST00000458530 ELSPBP1Q96BH3 223 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 LMLNQ96KR4 655 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 TSNARE1Q96NA8 513 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 FCRL3Q96P31 734 aaPredicted RBP8.97□□□□□ -0.97
VPS50-207ENST00000458530 TRIB3Q96RU7 358 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 RBBP8Q99708 897 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 RTKNQ9BST9 563 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 CPEB1Q9BZB8 566 aaKnown RBP8.97□□□□□ -0.97
VPS50-207ENST00000458530 TM6SF2Q9BZW4 377 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 IARS2Q9NSE4 1012 aaKnown RBP8.97□□□□□ -0.97
VPS50-207ENST00000458530 CORO1CQ9ULV4 474 aaPredicted RBP8.97□□□□□ -0.97
VPS50-207ENST00000458530 CHKBQ9Y259 395 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 PKP3Q9Y446 797 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 PCDHGA2Q9Y5H1 932 aa8.97□□□□□ -0.97
VPS50-207ENST00000458530 ANKRD66B4E2M5 251 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 GLRA3O75311 464 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 ECI2O75521 394 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 PGLSO95336 258 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 POP4O95707 220 aaKnown RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 MPOP05164 745 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 LAMP2P13473 410 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 OGNP20774 298 aaKnown RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 LPOP22079 712 aaPredicted RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 LSP1P33241 339 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 PPARGP37231 505 aaPredicted RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 CCNFP41002 786 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 EIF2DP41214 584 aaKnown RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 VIPR2P41587 438 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 CD151P48509 253 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 CCT5P48643 541 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 KPNA2P52292 529 aaKnown RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 POLR2LP62875 67 aaKnown RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 GUCY1A3Q02108 690 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 ACVR1Q04771 509 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 SLC18A2Q05940 514 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 TRAF2Q12933 501 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 ACCSLQ4AC99 568 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 TAF1BQ53T94 588 aaPredicted RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 CARD16Q5EG05 197 aa8.96□□□□□ -0.98
VPS50-207ENST00000458530 AARS2Q5JTZ9 985 aaKnown RBP8.96□□□□□ -0.98
VPS50-207ENST00000458530 ATXN7L2Q5T6C5 722 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms