RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 STK19P49842 368 aaPredicted RBP16.37■□□□□ 0.21
CAPN13-203ENST00000458085 STC1P52823 247 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 NAGLUP54802 743 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 LIPMQ5VYY2 423 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 MRNIPQ6NTE8 343 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 WDR75Q8IWA0 830 aaKnown RBP16.37■□□□□ 0.21
CAPN13-203ENST00000458085 TXNDC5Q8NBS9 432 aaKnown RBP16.37■□□□□ 0.21
CAPN13-203ENST00000458085 PPP4R1Q8TF05 950 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 EID2BQ96D98 161 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 UBXN10Q96LJ8 280 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 MCOLN1Q9GZU1 580 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 WWP1Q9H0M0 922 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 FAM96AQ9H5X1 160 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 ABCB8Q9NUT2 735 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 KIAA1522Q9P206 1035 aaPredicted RBP16.37■□□□□ 0.21
CAPN13-203ENST00000458085 FKBPLQ9UIM3 349 aa16.37■□□□□ 0.21
CAPN13-203ENST00000458085 C2orf81A6NN90 581 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 CLASP2O75122 1294 aaKnown RBP16.36■□□□□ 0.21
CAPN13-203ENST00000458085 PTPN2P17706 415 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 LPOP22079 712 aaPredicted RBP16.36■□□□□ 0.21
CAPN13-203ENST00000458085 KCNA5P22460 613 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 ELF3P78545 371 aaPredicted RBP16.36■□□□□ 0.21
CAPN13-203ENST00000458085 TYSND1Q2T9J0 566 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 TSNAXIP1Q2TAA8 658 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 TECRLQ5HYJ1 363 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 DGKKQ5KSL6 1271 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 RETSATQ6NUM9 610 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 PIANPQ8IYJ0 282 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 TTC8Q8TAM2 541 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 UTP4Q969X6 686 aaKnown RBP16.36■□□□□ 0.21
CAPN13-203ENST00000458085 ZSWIM3Q96MP5 696 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 LINC00597Q9H2U6 94 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 MRPL46Q9H2W6 279 aaKnown RBP16.36■□□□□ 0.21
CAPN13-203ENST00000458085 MID2Q9UJV3 735 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 C5orf42Q9H799 3197 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 CFAP73A6NFT4 308 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 GPR39O43194 453 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 HSPA4LO95757 839 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 MPSTP25325 297 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 PSMA3P25788 255 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 SPDYAQ5MJ70 313 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 CYB5D1Q6P9G0 228 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 TREML1Q86YW5 311 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 ACDQ96AP0 544 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 VOPP1Q96AW1 172 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 RILPQ96NA2 401 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 MRPL57Q9BQC6 102 aaKnown RBP16.36■□□□□ 0.21
CAPN13-203ENST00000458085 SHCBP1LQ9BZQ2 653 aa16.36■□□□□ 0.21
CAPN13-203ENST00000458085 TMEM114B3SHH9 223 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 LTA4HP09960 611 aaKnown RBP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 OGNP20774 298 aaKnown RBP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 FDXRP22570 491 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 PMLP29590 882 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 PEX6Q13608 980 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 FUT11Q495W5 492 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 FAM45BPQ6NSW5 357 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 PSAPL1Q6NUJ1 521 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 AFTPHQ6ULP2 937 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 GRASPQ7Z6J2 395 aaPredicted RBP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 FAM45AQ8TCE6 357 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 PIH1D2Q8WWB5 315 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 ING5Q8WYH8 240 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 PTCD3Q96EY7 689 aaKnown RBP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 TSPAN17Q96FV3 270 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 SAR1AQ9NR31 198 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 TDP1Q9NUW8 608 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 MED16Q9Y2X0 877 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 C5orf67F2Z3F1 127 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 TRAFD1O14545 582 aaPredicted RBP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 PGLSO95336 258 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 PFKLP17858 780 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 KCNC1P48547 511 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 IDH3AP50213 366 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 ALDH18A1P54886 795 aaKnown RBP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 CBX2Q14781 532 aaPredicted RBP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 FAM83EQ2M2I3 478 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 ARL13AQ5H913 290 aaPredicted RBP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 PITRM1Q5JRX3 1037 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 LYSMD3Q7Z3D4 306 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 RBM23Q86U06 439 aaKnown RBP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 LSMEM2Q8N112 164 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 MAPK15Q8TD08 544 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 MYLIPQ8WY64 445 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 MYO19Q96H55 970 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 AARSD1Q9BTE6 412 aaKnown RBP16.35■□□□□ 0.21
CAPN13-203ENST00000458085 DRC3Q9H069 523 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 LRMDAQ9H2I8 198 aa16.35■□□□□ 0.21
CAPN13-203ENST00000458085 UBA6A0AVT1 1052 aaPredicted RBP16.34■□□□□ 0.21
CAPN13-203ENST00000458085 NEDD8-MDP1E9PL57 170 aa16.34■□□□□ 0.21
CAPN13-203ENST00000458085 ALOX15P16050 662 aaPredicted RBP16.34■□□□□ 0.21
CAPN13-203ENST00000458085 SP100P23497 879 aaPredicted RBP16.34■□□□□ 0.21
CAPN13-203ENST00000458085 MC4RP32245 332 aa16.34■□□□□ 0.21
CAPN13-203ENST00000458085 EPHB1P54762 984 aa16.34■□□□□ 0.21
CAPN13-203ENST00000458085 AP1S1P61966 158 aa16.34■□□□□ 0.21
CAPN13-203ENST00000458085 TTC31Q49AM3 519 aaPredicted RBP16.34■□□□□ 0.21
CAPN13-203ENST00000458085 PRSS36Q5K4E3 855 aa16.34■□□□□ 0.21
CAPN13-203ENST00000458085 ARMC12Q5T9G4 340 aa16.34■□□□□ 0.21
CAPN13-203ENST00000458085 SDCCAG8Q86SQ7 713 aaPredicted RBP16.34■□□□□ 0.21
CAPN13-203ENST00000458085 ZSWIM9Q86XI8 627 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms