RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 SPECC1LQ69YQ0 1117 aa8.83□□□□□ -1
PKP4-207ENST00000457109 RAET1GQ6H3X3 334 aa8.83□□□□□ -1
PKP4-207ENST00000457109 ZDHHC1Q8WTX9 485 aa8.83□□□□□ -1
PKP4-207ENST00000457109 SNRNP27Q8WVK2 155 aaKnown RBP8.83□□□□□ -1
PKP4-207ENST00000457109 ECHDC3Q96DC8 303 aa8.83□□□□□ -1
PKP4-207ENST00000457109 PDXPQ96GD0 296 aa8.83□□□□□ -1
PKP4-207ENST00000457109 AHCYL2Q96HN2 611 aaKnown RBP8.83□□□□□ -1
PKP4-207ENST00000457109 NUDCD1Q96RS6 583 aa8.83□□□□□ -1
PKP4-207ENST00000457109 TMEM168Q9H0V1 697 aa8.83□□□□□ -1
PKP4-207ENST00000457109 FGF22Q9HCT0 170 aa8.83□□□□□ -1
PKP4-207ENST00000457109 MRPL40Q9NQ50 206 aaKnown RBP8.83□□□□□ -1
PKP4-207ENST00000457109 B4GALT6Q9UBX8 382 aa8.83□□□□□ -1
PKP4-207ENST00000457109 IP6K2Q9UHH9 426 aa8.83□□□□□ -1
PKP4-207ENST00000457109 ATXN7L1Q9ULK2 861 aaPredicted RBP8.83□□□□□ -1
PKP4-207ENST00000457109 RNF215Q9Y6U7 377 aa8.83□□□□□ -1
PKP4-207ENST00000457109 WDFY3Q8IZQ1 3526 aa8.83□□□□□ -1
PKP4-207ENST00000457109 A0A1W2PQC6 194 aa8.82□□□□□ -1
PKP4-207ENST00000457109 A0A1W2PQM1 296 aa8.82□□□□□ -1
PKP4-207ENST00000457109 MYO1FO00160 1098 aa8.82□□□□□ -1
PKP4-207ENST00000457109 PSMD11O00231 422 aa8.82□□□□□ -1
PKP4-207ENST00000457109 TRAFD1O14545 582 aaPredicted RBP8.82□□□□□ -1
PKP4-207ENST00000457109 LRCH4O75427 683 aa8.82□□□□□ -1
PKP4-207ENST00000457109 ASMTLO95671 621 aa8.82□□□□□ -1
PKP4-207ENST00000457109 LIPCP11150 499 aa8.82□□□□□ -1
PKP4-207ENST00000457109 SKILP12757 684 aa8.82□□□□□ -1
PKP4-207ENST00000457109 AMPD1P23109 780 aa8.82□□□□□ -1
PKP4-207ENST00000457109 CD82P27701 267 aa8.82□□□□□ -1
PKP4-207ENST00000457109 CSTF2P33240 577 aaKnown RBP eCLIP8.82□□□□□ -11e-6■■■■□ 21.8
PKP4-207ENST00000457109 MMP13P45452 471 aa8.82□□□□□ -1
PKP4-207ENST00000457109 ZNF165P49910 485 aa8.82□□□□□ -1
PKP4-207ENST00000457109 ATP1A2P50993 1020 aa8.82□□□□□ -1
PKP4-207ENST00000457109 CLPPQ16740 277 aaPredicted RBP8.82□□□□□ -1
PKP4-207ENST00000457109 TIGD7Q6NT04 549 aaPredicted RBP8.82□□□□□ -1
PKP4-207ENST00000457109 ARHGAP36Q6ZRI8 547 aa8.82□□□□□ -1
PKP4-207ENST00000457109 ZNF571Q7Z3V5 609 aaPredicted RBP8.82□□□□□ -1
PKP4-207ENST00000457109 SPRED1Q7Z699 444 aa8.82□□□□□ -1
PKP4-207ENST00000457109 B3GNT8Q7Z7M8 397 aa8.82□□□□□ -1
PKP4-207ENST00000457109 HEATR4Q86WZ0 1026 aa8.82□□□□□ -1
PKP4-207ENST00000457109 ZSWIM9Q86XI8 627 aa8.82□□□□□ -1
PKP4-207ENST00000457109 MAP7D3Q8IWC1 876 aa8.82□□□□□ -1
PKP4-207ENST00000457109 ARHGAP12Q8IWW6 846 aa8.82□□□□□ -1
PKP4-207ENST00000457109 USP7Q93009 1102 aa8.82□□□□□ -1
PKP4-207ENST00000457109 VOPP1Q96AW1 172 aa8.82□□□□□ -1
PKP4-207ENST00000457109 SGF29Q96ES7 293 aa8.82□□□□□ -1
PKP4-207ENST00000457109 SCRN2Q96FV2 425 aa8.82□□□□□ -1
PKP4-207ENST00000457109 COQ10AQ96MF6 247 aa8.82□□□□□ -1
PKP4-207ENST00000457109 DPYSL5Q9BPU6 564 aa8.82□□□□□ -1
PKP4-207ENST00000457109 BPIFA3Q9BQP9 254 aa8.82□□□□□ -1
PKP4-207ENST00000457109 ANP32EQ9BTT0 268 aa8.82□□□□□ -1
PKP4-207ENST00000457109 LGR4Q9BXB1 951 aa8.82□□□□□ -1
PKP4-207ENST00000457109 CDH19Q9H159 772 aa8.82□□□□□ -1
PKP4-207ENST00000457109 STN1Q9H668 368 aaKnown RBP8.82□□□□□ -1
PKP4-207ENST00000457109 NOD2Q9HC29 1040 aa8.82□□□□□ -1
PKP4-207ENST00000457109 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.82□□□□□ -1
PKP4-207ENST00000457109 TRNAU1APQ9NX07 287 aaKnown RBP8.82□□□□□ -1
PKP4-207ENST00000457109 TAAR2Q9P1P5 351 aa8.82□□□□□ -1
PKP4-207ENST00000457109 RABGEF1Q9UJ41 708 aa8.82□□□□□ -1
PKP4-207ENST00000457109 DNPEPQ9ULA0 475 aa8.82□□□□□ -1
PKP4-207ENST00000457109 A0A1W2PNU3 283 aaPredicted RBP8.81□□□□□ -1
PKP4-207ENST00000457109 TTC24A2A3L6 582 aaPredicted RBP8.81□□□□□ -1
PKP4-207ENST00000457109 DDX3XO00571 662 aaKnown RBP eCLIP8.81□□□□□ -17e-20■■□□□ 13.2
PKP4-207ENST00000457109 HTRA2O43464 458 aaPredicted RBP8.81□□□□□ -1
PKP4-207ENST00000457109 NOBOXO60393 691 aa8.81□□□□□ -1
PKP4-207ENST00000457109 C1QL1O75973 258 aa8.81□□□□□ -1
PKP4-207ENST00000457109 HEXIM1O94992 359 aaKnown RBP8.81□□□□□ -1
PKP4-207ENST00000457109 ZIC2O95409 532 aaPredicted RBP8.81□□□□□ -1
PKP4-207ENST00000457109 RARAP10276 462 aa8.81□□□□□ -1
PKP4-207ENST00000457109 HGFP14210 728 aa8.81□□□□□ -1
PKP4-207ENST00000457109 ETV3P41162 512 aa8.81□□□□□ -1
PKP4-207ENST00000457109 PRKCIP41743 596 aa8.81□□□□□ -1
PKP4-207ENST00000457109 GPR3P46089 330 aa8.81□□□□□ -1
PKP4-207ENST00000457109 OR1D5P58170 312 aa8.81□□□□□ -1
PKP4-207ENST00000457109 MAXP61244 160 aa8.81□□□□□ -1
PKP4-207ENST00000457109 SKOR1P84550 965 aa8.81□□□□□ -1
PKP4-207ENST00000457109 KCNC4Q03721 635 aa8.81□□□□□ -1
PKP4-207ENST00000457109 ZFP36L1Q07352 338 aaKnown RBP8.81□□□□□ -1
PKP4-207ENST00000457109 RALGDSQ12967 914 aa8.81□□□□□ -1
PKP4-207ENST00000457109 DPYSQ14117 519 aa8.81□□□□□ -1
PKP4-207ENST00000457109 HLTFQ14527 1009 aaKnown RBP eCLIP8.81□□□□□ -11e-6■■□□□ 11.4
PKP4-207ENST00000457109 NCAPHQ15003 741 aa8.81□□□□□ -1
PKP4-207ENST00000457109 CNGA3Q16281 694 aa8.81□□□□□ -1
PKP4-207ENST00000457109 DPYSL2Q16555 572 aa8.81□□□□□ -1
PKP4-207ENST00000457109 SMTNL2Q2TAL5 461 aa8.81□□□□□ -1
PKP4-207ENST00000457109 DOK6Q6PKX4 331 aa8.81□□□□□ -1
PKP4-207ENST00000457109 SLC30A9Q6PML9 568 aa8.81□□□□□ -1
PKP4-207ENST00000457109 Q6ZVL8 140 aa8.81□□□□□ -1
PKP4-207ENST00000457109 POLNQ7Z5Q5 900 aa8.81□□□□□ -1
PKP4-207ENST00000457109 ARFGAP1Q8N6T3 406 aa8.81□□□□□ -1
PKP4-207ENST00000457109 NPWQ8N729 165 aa8.81□□□□□ -1
PKP4-207ENST00000457109 KCTD6Q8NC69 237 aa8.81□□□□□ -1
PKP4-207ENST00000457109 GPBAR1Q8TDU6 330 aa8.81□□□□□ -1
PKP4-207ENST00000457109 TEKT4Q8WW24 435 aa8.81□□□□□ -1
PKP4-207ENST00000457109 AP2M1Q96CW1 435 aa8.81□□□□□ -1
PKP4-207ENST00000457109 DTD2Q96FN9 168 aa8.81□□□□□ -1
PKP4-207ENST00000457109 CSPG4P5Q96PW8 444 aa8.81□□□□□ -1
PKP4-207ENST00000457109 PEBP4Q96S96 227 aa8.81□□□□□ -1
PKP4-207ENST00000457109 TEX101Q9BY14 249 aa8.81□□□□□ -1
PKP4-207ENST00000457109 B3GNT4Q9C0J1 378 aa8.81□□□□□ -1
PKP4-207ENST00000457109 POLR1EQ9GZS1 481 aaKnown RBP8.81□□□□□ -1
PKP4-207ENST00000457109 ISCUQ9H1K1 167 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms