RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TSEN34Q9BSV6 310 aaKnown RBP18.41■□□□□ 0.54
SEMA3B-209ENST00000456560 CRYL1Q9Y2S2 319 aa18.41■□□□□ 0.54
SEMA3B-209ENST00000456560 ARL5AQ9Y689 179 aa18.41■□□□□ 0.54
SEMA3B-209ENST00000456560 CHD5Q8TDI0 1954 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 CFLARO15519 480 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 HOXD9P28356 352 aaPredicted RBP18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 HOXD10P28358 340 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 SUOXP51687 545 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 NFKB2Q00653 900 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 MS4A2Q01362 244 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 DUSP4Q13115 394 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 SEMA3AQ14563 771 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 GPNMBQ14956 572 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 UNC50Q53HI1 259 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 RTP2Q5QGT7 225 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 ZNF678Q5SXM1 525 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 FUT10Q6P4F1 479 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 ABI1Q8IZP0 508 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 BLOC1S5Q8TDH9 187 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 PTERQ96BW5 349 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 NPAS2Q99743 824 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 UTP6Q9NYH9 597 aaKnown RBP18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 FIS1Q9Y3D6 152 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 TRAF6Q9Y4K3 522 aa18.4■□□□□ 0.54
SEMA3B-209ENST00000456560 SLC38A8A6NNN8 435 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 ARSAP15289 507 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 CD1DP15813 335 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 HOXB8P17481 243 aaPredicted RBP18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 SLC6A4P31645 630 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 PKNOX1P55347 436 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 PTK2BQ14289 1009 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 GALNT3Q14435 633 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 SQLEQ14534 574 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 TRIP10Q15642 601 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 OGFRL1Q5TC84 451 aaPredicted RBP18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 GK5Q6ZS86 529 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 LRRC8DQ7L1W4 858 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 CFAP52Q8N1V2 620 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 GIPC2Q8TF65 315 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 BEGAINQ9BUH8 593 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 MRGBPQ9NV56 204 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 POLR3BQ9NW08 1133 aaPredicted RBP18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 HCSTQ9UBK5 93 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 TRIM17Q9Y577 477 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 PCDHB7Q9Y5E2 793 aa18.39■□□□□ 0.54
SEMA3B-209ENST00000456560 A0A0D9SEW6 157 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 A0A1W2PQ45 241 aaPredicted RBP18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 A0A1W2PQY0 241 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 F5H5T6 163 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 STX16-NPEPL1H3BU86 382 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 MYCP01106 439 aaPredicted RBP18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 ME2P23368 584 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 FLOT2Q14254 428 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 CYHR1Q6ZMK1 362 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 SDCCAG8Q86SQ7 713 aaPredicted RBP18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 PQLC1Q8N2U9 271 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 OR13C4Q8NGS5 318 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 USP13Q92995 863 aaPredicted RBP18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 TTLL2Q9BWV7 592 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 MAGEH1Q9H213 219 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 POPDC3Q9HBV1 291 aa18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 C6orf203Q9P0P8 240 aaPredicted RBP18.39■□□□□ 0.53
SEMA3B-209ENST00000456560 A0A1B0GVG6 124 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 UBDO15205 165 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 ACSL4O60488 711 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 NBNO60934 754 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 NDST3O95803 873 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 SELPP16109 830 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 ATF6P18850 670 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 OGNP20774 298 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 MED21Q13503 144 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 MRNIPQ6NTE8 343 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 EGFL6Q8IUX8 553 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 C2orf15Q8WU43 125 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 MGME1Q9BQP7 344 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 RETREG1Q9H6L5 497 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 VCX3AQ9NNX9 186 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 SAGE1Q9NXZ1 904 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 BCAP29Q9UHQ4 241 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 H3BNC9 293 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 H7C4K7 107 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 ACOT8O14734 319 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 BCAS2O75934 225 aaPredicted RBP18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 SLC4A1P02730 911 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 SERPINF2P08697 491 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 UQCRBP14927 111 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 AQP4P55087 323 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 RPL26P61254 145 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 GNA12Q03113 381 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 PPP1R3AQ16821 1122 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 TAS1R1Q7RTX1 841 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 DBF4BQ8NFT6 615 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 OR52K2Q8NGK3 314 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 OR4L1Q8NH43 312 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 RNF217Q8TC41 542 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 NSMCE3Q96MG7 304 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 MRPL1Q9BYD6 325 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 ACTL7AQ9Y615 435 aa18.38■□□□□ 0.53
SEMA3B-209ENST00000456560 MSX2P35548 267 aaPredicted RBP18.37■□□□□ 0.53
SEMA3B-209ENST00000456560 PSMD8P48556 350 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms