RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 SIX2Q9NPC8 291 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 PRKAG3Q9UGI9 489 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 HES2Q9Y543 173 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 H7C0S8 307 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 B4GALT4O60513 344 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 NTRK1P04629 796 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 IKBKEQ14164 716 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 ADGRE1Q14246 886 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 ZSWIM7Q19AV6 140 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 C6orf89Q6UWU4 347 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 MACC1Q6ZN28 852 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 LRRN4Q8WUT4 740 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 AP3S1Q92572 193 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 SLC47A1Q96FL8 570 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 GNPTGQ9UJJ9 305 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 TBX10O75333 385 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 GTF2E2P29084 291 aaKnown RBP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 RPS9P46781 194 aaKnown RBP12.06□□□□□ -0.48
SEC16A-207ENST00000453963 RALGDSQ12967 914 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 CYP2A13Q16696 494 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 UGCGQ16739 394 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 TEX44Q53QW1 395 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 GLYATQ6IB77 296 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 KRT74Q7RTS7 529 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 SPPL2CQ8IUH8 684 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 ITCHQ96J02 903 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 QRFPRQ96P65 431 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 BBS4Q96RK4 519 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 ZFP14Q9HCL3 533 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 MARCH2Q9P0N8 246 aa12.06□□□□□ -0.48
SEC16A-207ENST00000453963 DHX15O43143 795 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 LRIG2O94898 1065 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 SERPINA1P01009 418 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 SMIM10L2AP0DMW4 78 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 SMIM10L2BP0DMW5 78 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 CHRNB2P17787 502 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 RPL3P39023 403 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 RAB25P57735 213 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 SKP1P63208 163 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 NPY5RQ15761 445 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 DEFB115Q30KQ5 88 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 CERCAMQ5T4B2 595 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 SCIMPQ6UWF3 145 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 CBR4Q8N4T8 237 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 UBR7Q8N806 425 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 PTCD2Q8WV60 388 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 QKIQ96PU8 341 aaKnown RBP eCLIP12.05□□□□□ -0.488e-7■■■■□ 24.2
SEC16A-207ENST00000453963 ZYG11BQ9C0D3 744 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 SLITRK2Q9H156 845 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 RPRD1BQ9NQG5 326 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 PPP1R11O60927 126 aaPredicted RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 PPIBP23284 216 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 SERPINA4P29622 427 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 IDH3AP50213 366 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 CBX3Q13185 183 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 ITGA7Q13683 1181 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 PABPC1LQ4VXU2 614 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 PPP1R26Q5T8A7 1209 aaPredicted RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 RTL3Q8N8U3 475 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 ATL1Q8WXF7 558 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 HDAC10Q969S8 669 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 VMP1Q96GC9 406 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 RBM4BQ9BQ04 359 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 RBM4Q9BWF3 364 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 RNF19AQ9NV58 838 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 SAMD4AQ9UPU9 718 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 PTCH2Q9Y6C5 1203 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 YDJCA8MPS7 323 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 KCNU1A8MYU2 1149 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 MDM4O15151 490 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 GUCY1B2O75343 617 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 GCATO75600 419 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 FGF1P05230 155 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 WNT3AP56704 352 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 VWA5B1Q5TIE3 1220 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 CHADLQ6NUI6 762 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 PHF10Q8WUB8 498 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 ANKRD49Q8WVL7 239 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 MTFMTQ96DP5 389 aaKnown RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 SEMA3CQ99985 751 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 GATA5Q9BWX5 397 aaPredicted RBP12.05□□□□□ -0.48
SEC16A-207ENST00000453963 NLNQ9BYT8 704 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 SLC7A8Q9UHI5 535 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 ING4Q9UNL4 249 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 ANGPT4Q9Y264 503 aa12.05□□□□□ -0.48
SEC16A-207ENST00000453963 CLDN25C9JDP6 229 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 KPNA3O00505 521 aaPredicted RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 BUD23O43709 281 aaKnown RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 SGTAO43765 313 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 DNAJA2O60884 412 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 XYLBO75191 536 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 THRBP10828 461 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 MRPS6P82932 125 aaKnown RBP12.04□□□□□ -0.48
SEC16A-207ENST00000453963 GNA13Q14344 377 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 RALGPS1Q5JS13 557 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 GALNT18Q6P9A2 607 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 SLC26A9Q7LBE3 791 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 UXS1Q8NBZ7 420 aa12.04□□□□□ -0.48
SEC16A-207ENST00000453963 ROPN1LQ96C74 230 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms