RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 MGME1Q9BQP7 344 aa16.46■□□□□ 0.23
RPUSD3-209ENST00000451405 FAM117AQ9C073 453 aa16.46■□□□□ 0.23
RPUSD3-209ENST00000451405 FGF22Q9HCT0 170 aa16.46■□□□□ 0.23
RPUSD3-209ENST00000451405 ASCL3Q9NQ33 180 aa16.46■□□□□ 0.23
RPUSD3-209ENST00000451405 GPR34Q9UPC5 381 aa16.46■□□□□ 0.23
RPUSD3-209ENST00000451405 SATB2Q9UPW6 733 aa16.46■□□□□ 0.23
RPUSD3-209ENST00000451405 DGKBQ9Y6T7 804 aa16.46■□□□□ 0.23
RPUSD3-209ENST00000451405 KIF26BQ2KJY2 2108 aa16.46■□□□□ 0.23
RPUSD3-209ENST00000451405 NTN3O00634 580 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 DXOO77932 396 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 FUCA1P04066 466 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 HOXC4P09017 264 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 HSPA9P38646 679 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 SSR1P43307 286 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 TAS2R40P59535 323 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 KIAA1024LP59773 190 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 KRT81Q14533 505 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 CNGA3Q16281 694 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 C3orf38Q5JPI3 329 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 MARC1Q5VT66 337 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 DENND2CQ68D51 928 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 RBM44Q6ZP01 1051 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 GKN2Q86XP6 184 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 ATPAF2Q8N5M1 289 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 TEX26Q8N6G2 289 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 ARL10Q8N8L6 244 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 CCL4L1Q8NHW4 92 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 LRRN4Q8WUT4 740 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 SCG3Q8WXD2 468 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 TTC9Q92623 222 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 NAT6Q93015 286 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 PACSIN1Q9BY11 444 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 XPO4Q9C0E2 1151 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 TMEM168Q9H0V1 697 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 NT5MQ9NPB1 228 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 THSD1Q9NS62 852 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 PHTF1Q9UMS5 762 aa16.45■□□□□ 0.22
RPUSD3-209ENST00000451405 COL6A6A6NMZ7 2263 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 CACNB4O00305 520 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 SOCS5O75159 536 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 HEXIM1O94992 359 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 MAP3K6O95382 1288 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 CPP00450 1065 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 PDHA1P08559 390 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 KRT10P13645 584 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 LHCGRP22888 699 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 RBMS1P29558 406 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 VIPR1P32241 457 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 MMP13P45452 471 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 PDX1P52945 283 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 CCL7P80098 99 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 DPYSL3Q14195 570 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 ZSCAN23Q3MJ62 389 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 NCBP2-AS2Q69YL0 99 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 OGFOD3Q6PK18 319 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 HSD11B1LQ7Z5J1 315 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 TSPAN33Q86UF1 283 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 SDR16C5Q8N3Y7 309 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 GPR156Q8NFN8 814 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 ATL2Q8NHH9 583 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 ZNF564Q8TBZ8 553 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 PIH1D2Q8WWB5 315 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 CCDC74AQ96AQ1 378 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 IQCDQ96DY2 449 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 IL17BQ9UHF5 180 aa16.44■□□□□ 0.22
RPUSD3-209ENST00000451405 A0A1W2PQM1 296 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 NPIPB15A6NHN6 443 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 TNFRSF10CO14798 259 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 MFSD11O43934 449 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 TCEA3O75764 348 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 PGLSO95336 258 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 CTPS1P17812 591 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 HNRNPH3P31942 346 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 SERPINB6P35237 376 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 GJC1P36383 396 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 ETV3P41162 512 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 PAFAH1B3Q15102 231 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 HADHQ16836 314 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 KIAA1614Q5VZ46 1190 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 RFLNAQ6ZTI6 216 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 Q6ZVL8 140 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 TAF8Q7Z7C8 310 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 LURAP1LQ8IV03 231 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 BBS5Q8N3I7 341 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 FAM46DQ8NEK8 389 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 NSMCE1Q8WV22 266 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 PTCD2Q8WV60 388 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 NUS1Q96E22 293 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 SCRN2Q96FV2 425 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 SLC46A1Q96NT5 459 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 SYNDIG1Q9H7V2 258 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 CYP4F12Q9HCS2 524 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 WDR70Q9NW82 654 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 CTTNBP2NLQ9P2B4 639 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 RCOR3Q9P2K3 495 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 MOSPD1Q9UJG1 213 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 PPIL1Q9Y3C6 166 aa16.43■□□□□ 0.22
RPUSD3-209ENST00000451405 A0A1W2PQ67 120 aa16.42■□□□□ 0.22
RPUSD3-209ENST00000451405 FZD6O60353 706 aa16.42■□□□□ 0.22
RPUSD3-209ENST00000451405 NOBOXO60393 691 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms